Overview Annotation GWAS Evidence Associated genes

P24858

Metabolite ID
P24858
Deionized mass
212.0820 Da
Average m/z
213.0901
Average RT
14.5389
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
22
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

22 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G124800 hypothetical protein NA 9Chr04:16368438–16390781 (+)1.45e-12
Glyma.04G117400 hypothetical protein AT5G51540:AT5G51540:Zincin-like metalloproteases family protein 3Chr04:13774897–13822716 (-)9.39e-13
Glyma.04G124600 hypothetical protein NA 2Chr04:16329983–16332898 (-)2.946e-11
Glyma.04G125100 hypothetical protein NA 2Chr04:16472994–16473578 (-)1.45e-12
Glyma.04G125300 hypothetical protein NA 2Chr04:16500908–16508912 (+)2.946e-11
Glyma.04G114800 hypothetical protein AT1G55620:CLC-F:chloride channel F 1Chr04:13063675–13092388 (+)1.953e-12
Glyma.04G115900 hypothetical protein AT5G56280:CSN6A:COP9 signalosome subunit 6A 1Chr04:13323127–13333757 (+)2.866e-11
Glyma.04G116300 hypothetical protein NA 1Chr04:13420438–13424668 (-)2.866e-11
Glyma.04G116700 hypothetical protein AT5G56290:PEX5:peroxin 5 1Chr04:13564336–13589776 (+)2.866e-11
Glyma.04G116800 hypothetical protein NA 1Chr04:13650519–13653737 (+)2.866e-11
Glyma.04G117800 hypothetical protein AT2G30695:AT2G30695:bacterial trigger factor 1Chr04:13823885–13830604 (-)2.866e-11
Glyma.04G124900 hypothetical protein NA 1Chr04:16399212–16402624 (-)2.946e-11
Glyma.04G125500 hypothetical protein AT1G73100:SUVH3:histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH3-like protein__AT5G04940:SUVH1:SU(VAR)3-9… 1Chr04:16532221–16536664 (-)9.806e-11
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)4.576e-12
Glyma.08G109400 CHS1 AT5G13930:TT4:Chalcone and stilbene synthase family protein 1Chr08:8391364–8394840 (+)2.383e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)4.576e-12
Glyma.08G110200 hypothetical protein NA 1Chr08:8471393–8473156 (+)7.301e-12
Glyma.08G113600 hypothetical protein AT1G55320:AAE18:acyl-activating enzyme 18 1Chr08:8713767–8722379 (-)6.012e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)3.497e-12
Glyma.13G216500 hypothetical protein AT2G39090:APC7:tetratricopeptide repeat (TPR)-containing protein 1Chr13:32966286–32973567 (-)6.453e-12
Glyma.13G217000 hypothetical protein AT5G18550:AT5G18550:Zinc finger C-x8-C-x5-C-x3-H type family protein 1Chr13:32995492–33002746 (-)6.453e-12
Glyma.18G027300 hypothetical protein NA 1Chr18:2049280–2053959 (-)1.692e-11