SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G104400

Description hypothetical protein

Gene interval Chr04:9885009–9889282 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features643Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

643 matching features · page 42 of 65

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P29939 Sodium 2-O-L-rhamnopyranosyl-4-deoxy-alpha-L-threo-hex-4-eno-pyranosiduronate 322.0896 13.775e-11
P29997 CDP-DG(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/22:5(7Z,10Z,13Z,16Z,19Z)) 1099.5327 15.029e-11
P30000 N-(1-methyl-2-hydroxy-2-phenyl-ethyl)-5Z,8Z,11Z,14Z-eicosatetraenoyl amine 437.3308 13.777e-11
P30042 No candidate annotation 939.4715 15.752e-11
P30151 Gelsebanine 504.2614 17.624e-11
P30224 2alpha,3alpha,4beta,15,16-Pentahydroxy-ent-cleroda-13Z-ene 356.2536 14.402e-11
P30313 Sufotidine 421.2175 11.397e-13
P30337 3,6-Dimethyl-1,4-dioxane-2,5-dione 144.0402 15.988e-11
P30443 Vaccihein A 378.0951 15.774e-13
P30533 No candidate annotation 363.0742 14.79e-12