Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P30151

Metabolite ID
P30151
Deionized mass
504.2614 Da
Average m/z
505.2753
Average RT
15.9576
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.011e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 2Chr12:36390283–36394245 (-)1.44e-13
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.172e-14
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)7.193e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)8.484e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)6.961e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)7.624e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)7.338e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.655e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)2.51e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)2.51e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.539e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.65e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.65e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.65e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)5.766e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.204e-11
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)8.767e-13
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.011e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.011e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)2.024e-11
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)4.57e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)8.57e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.245e-17
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.99e-16
Glyma.12G183700 hypothetical protein AT2G27600:SKD1:AAA-type ATPase family protein 1Chr12:34470517–34477475 (-)6.417e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)9.839e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.794e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.794e-12
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)3.906e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)1.221e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.372e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.372e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)4.151e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)1.169e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)8.946e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.452e-13
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.266e-17
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.452e-13
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.452e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.071e-11
Glyma.15G140400 hypothetical protein NA 1Chr15:11495189–11495691 (+)4.371e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.829e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.03e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.17e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)1.797e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.834e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)6.811e-11