SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.04G062500

Description hypothetical protein

Gene interval Chr04:5158262–5163060 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features35Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

35 matching features · page 1 of 4

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00850 Guanidinoethyl disulfide 236.0864 19.893e-13
P01956 6,2'4'-Trihydroxy-2-phenylbenzofuran 242.0592 11.718e-11
P04255 3,5,8,3',4',5'-Hexahydroxyflavone 318.0396 11.145e-11
P05672 5-Amino-6-(5'-phosphoribosylamino)uracil 354.0577 14.684e-11
P06623 5-Formylbenzofuran 146.0367 18.776e-12
P06628 6-Amino-5-nitro-4-imino-beta-D-ribofuranosylpyrimidine. 287.0844 15.024e-11
P08557 Dracorubin 488.1612 14.864e-13
P09933 Dulcisxanthone H 378.1450 12.294e-15
P10920 Betalamic acid 211.0473 18.089e-11
P13500 15alpha-acetoxy-16beta,17beta-epoxy-6beta,14beta-dihydroxy-1-oxo-2alpha,5alpha-dioxy-witha3,24-dien-26,22-olide 558.2473 18.737e-11