Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P00850

Metabolite ID
P00850
Deionized mass
236.0864 Da
Average m/z
237.0923
Average RT
3.6970
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
93
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

93 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)2.455e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.416e-13
Glyma.01G036200 hypothetical protein AT1G10510:emb2004:RNI-like superfamily protein 3Chr01:3791180–3811591 (-)1.072e-12
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 3Chr13:31727841–31735910 (-)4.642e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)3.367e-11
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)4.173e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)5.199e-12
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)5.2e-12
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)5.2e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.025e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.416e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.359e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)2.713e-11
Glyma.01G036500 hypothetical protein AT1G59980:ARL2:ARG1-like 2__AT1G24120:ARL1:ARG1-like 1 1Chr01:3821377–3825854 (-)1.072e-12
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)1.973e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)9.157e-13
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.494e-15
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)6.649e-13
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)3.21e-11
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)4.118e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)1.4e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)8.703e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.438e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)3.659e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.097e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.199e-12
Glyma.04G062500 hypothetical protein NA 1Chr04:5158262–5163060 (-)9.893e-13
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.129e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)6.385e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)2.907e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)9.839e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)9.839e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)9.839e-11
Glyma.05G191600 hypothetical protein AT2G13680:CALS5:callose synthase 5 1Chr05:37711639–37726572 (-)5.799e-11
Glyma.05G232400 hypothetical protein AT3G24440:VRN5:Fibronectin type III domain-containing protein 1Chr05:40992124–41003814 (+)4.977e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.351e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.493e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)6.411e-12
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)2.222e-11
Glyma.08G211300 hypothetical protein AT1G52630:AT1G52630:O-fucosyltransferase family protein 1Chr08:17059736–17062962 (+)9.184e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)3.812e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.8e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.5e-12
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)4.215e-11
Glyma.09G238200 NIP2-1 putative Si transporter NIP2-1 NA 1Chr09:46029192–46034136 (+)3.283e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.445e-12
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)9.868e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)4.054e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)3.301e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)5.2e-12
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)5.2e-12
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)5.2e-12
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)5.2e-12
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)5.2e-12
Glyma.09G276300 WNK10 AT3G51630:WNK5:with no lysine (K) kinase 5 1Chr09:49161113–49166087 (+)1.922e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)3.168e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.385e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.032e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.647e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.647e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.647e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.647e-12
Glyma.11G145100 hypothetical protein NA 1Chr11:11144477–11150703 (+)2.193e-12
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)9.483e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)3.884e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.703e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)2.703e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.788e-15
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)9.101e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)4.642e-13
Glyma.13G203600 hypothetical protein AT5G13490:AAC2:ADP/ATP carrier 2 1Chr13:31753843–31756013 (-)1.596e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)4.642e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.78e-14
Glyma.13G204200 hypothetical protein NA 1Chr13:31822330–31826011 (+)2.829e-11
Glyma.14G094200 hypothetical protein AT5G11840:AT5G11840:YCF36, putative (DUF1230) 1Chr14:8770378–8774149 (-)7.084e-11
Glyma.14G094300 hypothetical protein NA 1Chr14:8771316–8772515 (+)7.084e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.703e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.733e-12
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)3.256e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)6.063e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.372e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.372e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)9.681e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)5.993e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)4.239e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)5.691e-11
Glyma.18G044100 hypothetical protein NA 1Chr18:3809348–3812858 (-)8.791e-11
Glyma.18G044200 hypothetical protein AT5G17300:RVE1:Homeodomain-like superfamily protein 1Chr18:3813589–3817289 (-)8.791e-11
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)2.727e-11
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)2.455e-11
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.136e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)3.414e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)1.106e-12