SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G119400

Description hypothetical protein

Gene interval Chr03:33050663–33053094 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features296Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

296 matching features · page 11 of 30

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P19235 (-)-Oriciacridone A 636.2152 11.79e-11
P19238 No candidate annotation 945.3839 15.797e-11
P19278 Fagopyrine 670.2250 15.75e-11
P19378 8-(5-Chloro-2-(4-methylpiperazin-1-yl)isonicotinamido)-1-(4-fluorophenyl)-4,5-dihydro-1H-benzo[g]indazole-3-carboxamide 559.1962 14.212e-11
P19400 Streptenol D 186.1240 14.863e-11
P19477 4-Hydroxy-2-oxohexanoic acid 146.0561 11.115e-11
P19638 Benfuracarb 410.1889 13.277e-11
P19709 Aclacinomycin Y 809.3265 12.577e-12
P19863 22R-benzoyl-25-acetoxy-2beta,3beta,14alpha,20-tetrahydroxy-5beta-cholest-7-en-6-one 626.3448 11.213e-18
P20173 Pinocembrin 7-O-neohesperidoside 3'''-O-acetate 606.2006 11.86e-14