Overview Annotation GWAS Evidence Associated genes

P19378

Metabolite ID
P19378
Deionized mass
559.1962 Da
Average m/z
560.2010
Average RT
13.0277
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
11
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

11 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G147900 hypothetical protein NA 3Chr16:30864919–30872425 (+)1.782e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)2.524e-14
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)4.212e-11
Glyma.05G139200 hypothetical protein NA 1Chr05:33173197–33181398 (+)4.649e-13
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)9.956e-12
Glyma.09G209900 hypothetical protein AT1G31930:XLG3:extra-large GTP-binding protein 3 1Chr09:43412726–43419532 (+)2.964e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.798e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.798e-11
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)2.289e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.738e-11
Glyma.18G184200 hypothetical protein NA 1Chr18:44364673–44366631 (-)7.971e-12