Overview Annotation GWAS Evidence Associated genes

P19638

Metabolite ID
P19638
Deionized mass
410.1889 Da
Average m/z
411.1977
Average RT
13.0904
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
17
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

17 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G061700 hypothetical protein AT2G23450:AT2G23450:Protein kinase superfamily protein 2Chr02:5577271–5582873 (-)2.974e-11
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)2.646e-12
Glyma.06G201700 hypothetical protein NA 2Chr06:18577883–18617874 (+)8.076e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 2Chr19:1155711–1161298 (-)5.552e-15
Glyma.19G012300 hypothetical protein NA 2Chr19:1165111–1173031 (-)5.552e-15
Glyma.02G277200 hypothetical protein AT5G12290:DGS1:dgd1 suppressor 1 1Chr02:45999642–46007578 (+)8.193e-11
Glyma.02G277400 hypothetical protein AT2G26770:SCAB1:plectin-like protein 1Chr02:46014763–46020988 (-)8.193e-11
Glyma.02G277500 hypothetical protein AT1G54140:TAFII21:TATA binding protein associated factor 21kDa subunit 1Chr02:46027755–46029924 (+)8.193e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)5.559e-14
Glyma.03G119400 hypothetical protein AT5G43280:DCI1:delta(3,5),delta(2,4)-dienoyl-CoA isomerase 1 1Chr03:33050663–33053094 (+)3.277e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)5.8e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)4.183e-13
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)2.586e-12
Glyma.11G089700 hypothetical protein AT4G19180:AT4G19180:GDA1/CD39 nucleoside phosphatase family protein 1Chr11:6789468–6793157 (-)9.174e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)9.014e-16
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)5.679e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)6.303e-12