SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.03G018800

Description hypothetical protein

Gene interval Chr03:1875182–1876855 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT2G45680:TCP9:TCP family transcription factor

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓

Associated metabolite features595Overlap

Maximum supporting SNP records2

Features with ≥2 supporting SNP records317

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.5328.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

AT2G45680NCBI Gene ↗UniProt ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

595 matching features · page 15 of 60

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P27912	Siroheme	862.2885	2	5.48e-12
P27981	Notoamide G	477.2233	2	8.484e-13
P28200	Abt-737	812.2581	2	2.049e-11
P28434	5,6-Epoxyoctadeca-7,9-diynoic acid	290.1834	2	6.959e-14
P29027	Bazzanin J	492.0855	2	2.348e-15
P29106	PGP(PGE2/22:5(7Z,10Z,13Z,16Z,19Z))	972.4792	2	5.436e-11
P29378	No candidate annotation	906.3320	2	5.032e-12
P29567	Lesopitron	320.1499	2	1.184e-11
P29611	Tabun	162.0564	2	1.933e-14
P30042	No candidate annotation	939.4715	2	2.136e-12