SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.03G002100

Description hypothetical protein

Gene interval Chr03:211934–216522 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT5G01930:MAN6:Glycosyl hydrolase superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features88Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

88 matching features · page 8 of 9

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P31845 Indane 118.0777 12.278e-11
P32309 p-Formylbenzoic acid 150.0301 12.783e-11
P32513 Cefbuperazone 627.1640 16.946e-13
P33175 Chrysosporide 509.3630 13.185e-11
P33510 2-Isopropylfuran 110.0723 15.063e-12
P34873 (R)-2-Methylimino-1-phenylpropan-1-ol 163.0982 12.824e-13
P35865 Thielavin L 626.2300 12.97e-11
P36599 No candidate annotation 138.0138 16.039e-12
P39072 chiglitazar 572.2152 16.237e-11
P39724 Akt inhibitor VIII 551.2473 14.669e-11