Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32309

Metabolite ID
P32309
Deionized mass
150.0301 Da
Average m/z
151.0379
Average RT
16.6244
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
74
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

74 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)2.527e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)7.398e-15
Glyma.04G129500 hypothetical protein AT3G21060:RBL:Transducin/WD40 repeat-like superfamily protein 2Chr04:18096368–18109438 (+)7.162e-11
Glyma.11G228400 hypothetical protein AT2G40070:AT2G40070:flocculation FLO11-like protein 2Chr11:32375284–32381183 (-)8.578e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)3.744e-14
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)1.182e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)6.068e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 2Chr19:1123637–1130946 (+)6.639e-15
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 2Chr19:1148510–1149495 (+)2.688e-11
Glyma.20G098600 hypothetical protein AT4G01470:TIP1;3:tonoplast intrinsic protein 1;3 2Chr20:34184591–34191923 (+)3.563e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.763e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.763e-11
Glyma.02G081600 hypothetical protein NA 1Chr02:7054190–7055955 (-)3.24e-11
Glyma.03G001400 hypothetical protein AT2G38610:AT2G38610:RNA-binding KH domain-containing protein 1Chr03:160599–165525 (+)5.871e-11
Glyma.03G001600 hypothetical protein AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:177390–180789 (-)8.884e-11
Glyma.03G002100 hypothetical protein AT5G01930:MAN6:Glycosyl hydrolase superfamily protein 1Chr03:211934–216522 (+)2.783e-11
Glyma.03G002400 hypothetical protein AT5G25780:EIF3B-2:eukaryotic translation initiation factor 3B-2 1Chr03:234217–238375 (-)2.783e-11
Glyma.04G129600 hypothetical protein NA 1Chr04:18110585–18112762 (+)7.162e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.053e-16
Glyma.04G190700 hypothetical protein NA 1Chr04:46143583–46146881 (+)2.42e-11
Glyma.04G190800 hypothetical protein AT5G07460:PMSR2:peptidemethionine sulfoxide reductase 2 1Chr04:46143080–46147709 (-)2.42e-11
Glyma.05G125800 hypothetical protein AT2G34790:MEE23:FAD-binding Berberine family protein 1Chr05:31926976–31929133 (+)2.538e-13
Glyma.07G040200 hypothetical protein NA 1Chr07:3324393–3329481 (-)6.313e-11
Glyma.07G069400 hypothetical protein AT2G46020:BRM:transcription regulatory protein SNF2 1Chr07:6270176–6283087 (-)2.358e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)3.295e-11
Glyma.09G042500 hypothetical protein AT5G49170:AT5G49170:uncharacterized protein 1Chr09:3625197–3626544 (+)5.097e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)2.322e-12
Glyma.11G228300 hypothetical protein NA 1Chr11:32365729–32370854 (+)5.514e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)2.843e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)2.843e-13
Glyma.13G200800 hypothetical protein AT2G21510:AT2G21510:DNAJ heat shock N-terminal domain-containing protein 1Chr13:31438634–31445721 (+)9.316e-11
Glyma.13G201300 hypothetical protein NA 1Chr13:31497499–31499001 (+)4.074e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.469e-11
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.909e-16
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.59e-14
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)7.478e-11
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)8.274e-14
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)8.274e-14
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.519e-13
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)4.808e-14
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)4.808e-14
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)4.808e-14
Glyma.14G134600 hypothetical protein AT4G31450:AT4G31450:RING/U-box superfamily protein 1Chr14:23491895–23497735 (-)9.939e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)3.744e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)9.399e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.925e-15
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)1.117e-14
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)1.117e-14
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)7.724e-12
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)2.668e-11
Glyma.16G075000 hypothetical protein NA 1Chr16:7556129–7570025 (+)2.39e-12
Glyma.16G075600 hypothetical protein AT4G19450:AT4G19450:Major facilitator superfamily protein 1Chr16:7617667–7623067 (-)3.486e-11
Glyma.16G075800 hypothetical protein AT4G19420:AT4G19420:Pectinacetylesterase family protein 1Chr16:7646131–7651379 (+)1.171e-13
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.047e-12
Glyma.16G139100 hypothetical protein NA 1Chr16:29632332–29634248 (-)1.709e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.403e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)7.454e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)7.454e-11
Glyma.17G121800 hypothetical protein AT1G73965:CLE13:CLAVATA3/ESR-RELATED 13 1Chr17:9746590–9748712 (+)4.546e-14
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)6.068e-11
Glyma.18G048700 hypothetical protein NA 1Chr18:4191224–4196633 (+)3.737e-12
Glyma.18G049200 hypothetical protein AT3G54210:AT3G54210:Ribosomal protein L17 family protein 1Chr18:4232694–4235086 (+)1.579e-11
Glyma.18G050000 hypothetical protein NA 1Chr18:4309070–4316534 (-)3.553e-11
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)1.903e-11
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)6.639e-15
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.893e-15
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.893e-15
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.792e-13
Glyma.20G013100 hypothetical protein NA 1Chr20:1134080–1135710 (-)1.881e-12
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)1.761e-14
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)1.646e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.106e-11
Glyma.20G019900 hypothetical protein NA 1Chr20:2058888–2064537 (+)1.223e-11
Glyma.20G099900 hypothetical protein AT5G23390:AT5G23390:polygalacturonase inhibitor (DUF639) 1Chr20:34312783–34318966 (+)2.274e-12