SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G304000

Description hypothetical protein

Gene interval Chr02:47908136–47915999 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog AT1G51350:AT1G51350:ARM repeat superfamily protein

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features264Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0152.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Arabidopsis IDs in the supplied annotation

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

264 matching features · page 11 of 27

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P20663 Isosophoranone 438.2010 11.644e-11
P20933 16-bromo-9E-hexadecenoic acid 332.1350 14.926e-11
P21354 1alpha,5alpha-Epidithio-17a-oxa-D-homoandrostan-3,17-dione 366.1329 14.158e-11
P21455 Geranyl acetoacetate 238.1536 16.801e-12
P21659 6-Butyryl-5,7-dihydroxy-8-(3',3'-dimethylallyl)-4-phenylcoumarin 392.1604 13.546e-12
P21669 Altromycin H 679.2598 13.311e-11
P22124 No candidate annotation 392.6469 15.717e-11
P22257 Mesoporphyrin IX dichloride 602.2213 12.766e-12
P22564 No candidate annotation 697.2720 11.495e-11
P22928 5'-Methoxybilobetin 582.1182 19.285e-11