SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

Gene Associated metabolites Research resources

GENE DETAIL · Glycine max

Glyma.02G188300

Description hypothetical protein

Gene interval Chr02:35008552–35027979 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features163Overlap

Maximum supporting SNP records4

Features with ≥2 supporting SNP records163

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.1104.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

SoyBase ↗Gene models and soybean annotations
NCBI Gene ↗Gene records, sequences and cross-references
UniProt ↗Protein function, domains and annotation evidence
PubMed ↗Publications mentioning this identifier

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

163 matching features · page 6 of 17

Metabolite ID	Candidate annotation	Deionized mass (Da)	Supporting SNP records	Minimum P
P18621	(4Z,6Z)-Octa-4,6-dienoylcarnitine	283.1757	2	6.511e-11
P20611	cis-1,2-Dihydroxy-1,2-dihydro-7-hydroxymethylnaphthalene	192.0788	2	6.314e-12
P20987	Cyanidin 3-(6''-malonylglucoside)	534.0975	2	9.445e-11
P21264	No candidate annotation	161.0127	2	3.503e-11
P21326	4-methyl-3-pentenoic acid	114.0670	2	1.537e-11
P21418	Lyngbyabellin I	879.2769	2	1.188e-11
P21913	Eremosulphoxinolide A	464.1861	2	4.803e-11
P22151	No candidate annotation	858.3587	2	3.288e-11
P22199	Homaline	490.3360	2	2.752e-11
P22608	No candidate annotation	409.6797	2	9.125e-12