Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21264

Metabolite ID
P21264
Deionized mass
161.0127 Da
Average m/z
162.0209
Average RT
13.5226
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
132
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

132 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)1.102e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.848e-11
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)4.04e-15
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)1.637e-11
Glyma.20G106300 hypothetical protein AT2G16950:TRN1:transportin 1 3Chr20:34868954–34885305 (-)9.09e-11
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)3.503e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)6.538e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.326e-15
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)1.278e-14
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)5.349e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.041e-11
Glyma.16G172500 hypothetical protein AT3G59140:ABCC10:multidrug resistance-associated protein 14 2Chr16:33322352–33330062 (+)3.94e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)8.728e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.088e-11
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)8.723e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)7.926e-13
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)1.935e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.848e-11
Glyma.01G032400 hypothetical protein NA 1Chr01:3404831–3411453 (+)3.697e-11
Glyma.01G034300 hypothetical protein NA 1Chr01:3573149–3579461 (-)3.417e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)5.889e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)7.153e-11
Glyma.01G168800 hypothetical protein AT1G24430:AT1G24430:HXXXD-type acyl-transferase family protein 1Chr01:50633986–50636589 (+)6.764e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.174e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.174e-12
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)2.926e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)1.243e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)4.348e-17
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.265e-12
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)8.535e-11
Glyma.04G018000 hypothetical protein AT5G42310:AT5G42310:Pentatricopeptide repeat (PPR-like) superfamily protein 1Chr04:1402993–1407323 (-)7.43e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)1.646e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.325e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)6.454e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)5.514e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)1.02e-11
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)3.784e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.385e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.917e-12
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.917e-12
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.917e-12
Glyma.05G131200 hypothetical protein AT5G58230:MSI1:Transducin/WD40 repeat-like superfamily protein 1Chr05:32421116–32425198 (-)4.74e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)3.717e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)8.262e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.309e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.269e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.117e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)4.063e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.176e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.176e-12
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)1.484e-11
Glyma.06G130700 hypothetical protein AT5G53060:RCF3:RNA-binding KH domain-containing protein 1Chr06:10742110–10747597 (-)4.394e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)4.498e-12
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)1.627e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.357e-11
Glyma.07G068400 hypothetical protein AT1G29320:AT1G29320:Transducin/WD40 repeat-like superfamily protein 1Chr07:6173172–6180430 (-)9.279e-11
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)9.279e-11
Glyma.07G068700 hypothetical protein AT2G46060:AT2G46060:transmembrane protein-like protein 1Chr07:6200187–6208590 (+)5.993e-11
Glyma.07G068800 hypothetical protein NA 1Chr07:6211775–6221107 (-)5.993e-11
Glyma.07G069100 hypothetical protein NA 1Chr07:6246145–6250192 (+)9.279e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)6.827e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)5.947e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)4.04e-15
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)4.04e-15
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)4.04e-15
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)4.04e-15
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)3.668e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)6.47e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.918e-12
Glyma.09G252100 hypothetical protein AT1G79790:FHY1:Haloacid dehalogenase-like hydrolase (HAD) superfamily protein 1Chr09:47245185–47248478 (+)9.694e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)6.208e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)4.685e-12
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)1.947e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)5.993e-12
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)1.476e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)3.248e-13
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.254e-12
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.254e-12
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.254e-12
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.254e-12
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.803e-12
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)2.358e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)6.718e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)6.718e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.098e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.098e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.098e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)3.042e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)2.74e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)2.943e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.694e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)1.278e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)5.349e-12
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)9.863e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)3.1e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)4.235e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.741e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)4.943e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)5.872e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)7.042e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.358e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.153e-11
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)1.02e-11
Glyma.16G189000 hypothetical protein NA 1Chr16:35160485–35167548 (-)9.188e-11
Glyma.16G189200 hypothetical protein AT3G48970:AT3G48970:Heavy metal transport/detoxification superfamily protein 1Chr16:35177846–35179798 (+)5.527e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)7.912e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.066e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.066e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.179e-16
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.179e-16
Glyma.17G092800 hypothetical protein NA 1Chr17:7253511–7255621 (-)3.505e-13
Glyma.17G118900 hypothetical protein NA 1Chr17:9401882–9402864 (+)9.455e-13
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)1.727e-11
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)4.257e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)7.541e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.367e-13
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)8.724e-12
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)9.497e-11
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)2.142e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.096e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.096e-13
Glyma.19G119200 hypothetical protein AT3G03630:CS26:cysteine synthase 26 1Chr19:37677773–37683394 (+)1.553e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)2.219e-11
Glyma.19G138700 hypothetical protein AT2G41740:VLN2:villin 2 1Chr19:40010487–40023584 (-)4.195e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.505e-13
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)1.102e-11
Glyma.20G105000 F-box/LRR-repeat protein 10 AT2G17020:AT2G17020:F-box/RNI-like superfamily protein 1Chr20:34726756–34729686 (+)8.621e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)1.155e-13
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)8.659e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.367e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.396e-13
Glyma.20G107700 hypothetical protein AT2G16860:AT2G16860:GCIP-interacting family protein 1Chr20:35033414–35036538 (+)2.194e-11