P20987
Metabolite ID
P20987
Deionized mass
534.0975 Da
Average m/z
535.1066
Average RT
13.4592
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
80
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
80 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.893e-11 | |
| Glyma.02G188300 | hypothetical protein | NA | 2 | Chr02:35008552–35027979 (-) | 9.445e-11 | |
| Glyma.04G064500 | hypothetical protein | NA | 2 | Chr04:5367346–5372857 (+) | 8.951e-11 | |
| Glyma.11G061000 | hypothetical protein | AT4G37210:AT4G37210:Tetratricopeptide repeat (TPR)-like superfamily protein | 2 | Chr11:4576441–4579697 (+) | 3.848e-11 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 4.146e-14 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 3.775e-14 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 1.017e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 1.017e-13 | |
| Glyma.16G121500 | hypothetical protein | NA | 2 | Chr16:27007186–27010856 (+) | 3.678e-13 | |
| Glyma.16G180100 | hypothetical protein | NA | 2 | Chr16:34070806–34076053 (+) | 1.49e-11 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1134716–1143232 (+) | 9.293e-12 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.893e-11 | |
| Glyma.02G193800 | hypothetical protein | AT5G06470:AT5G06470:Glutaredoxin family protein | 1 | Chr02:36706657–36712744 (-) | 2.711e-11 | |
| Glyma.02G293100 | hypothetical protein | AT3G20800:AT3G20800:Cell differentiation, Rcd1-like protein | 1 | Chr02:47183443–47188007 (-) | 4.312e-12 | |
| Glyma.03G209700 | hypothetical protein | NA | 1 | Chr03:41646792–41648527 (+) | 9.851e-13 | |
| Glyma.03G250400 | hypothetical protein | AT3G04470:AT3G04470:Ankyrin repeat family protein | 1 | Chr03:44616824–44621636 (-) | 9.259e-11 | |
| Glyma.05G126400 | hypothetical protein | NA | 1 | Chr05:31961493–31968339 (+) | 2.495e-11 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 4.45e-16 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 7.263e-16 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 7.263e-16 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 5.511e-14 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 6.678e-14 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 6.678e-14 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 6.678e-14 | |
| Glyma.05G224700 | hypothetical protein | NA | 1 | Chr05:40351005–40361888 (+) | 8.061e-12 | |
| Glyma.05G226000 | hypothetical protein | AT5G19730:AT5G19730:Pectin lyase-like superfamily protein | 1 | Chr05:40458098–40461736 (+) | 1.835e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.315e-12 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 6.508e-14 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 2.363e-16 | |
| Glyma.06G081600 | hypothetical protein | AT5G11490:AT5G11490:adaptin family protein | 1 | Chr06:6273644–6283819 (+) | 2.764e-11 | |
| Glyma.06G112300 | hypothetical protein | AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase | 1 | Chr06:9113982–9118848 (-) | 5.272e-12 | |
| Glyma.06G112600 | hypothetical protein | AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein | 1 | Chr06:9134358–9144986 (+) | 5.272e-12 | |
| Glyma.06G112700 | hypothetical protein | AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein | 1 | Chr06:9156973–9158659 (+) | 5.272e-12 | |
| Glyma.06G132800 | hypothetical protein | AT4G27680:AT4G27680:P-loop containing nucleoside triphosphate hydrolases superfamily protein__AT5G53540:AT5G53540:P-loo… | 1 | Chr06:10938746–10944330 (-) | 6.189e-13 | |
| Glyma.06G133000 | hypothetical protein | NA | 1 | Chr06:10954830–10958961 (+) | 6.189e-13 | |
| Glyma.06G133400 | hypothetical protein | AT5G53570:AT5G53570:Ypt/Rab-GAP domain of gyp1p superfamily protein | 1 | Chr06:10976199–10981248 (-) | 6.189e-13 | |
| Glyma.06G133600 | hypothetical protein | NA | 1 | Chr06:10992766–10995481 (+) | 6.189e-13 | |
| Glyma.06G133800 | hypothetical protein | NA | 1 | Chr06:11001171–11002938 (-) | 6.189e-13 | |
| Glyma.06G136200 | hypothetical protein | AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein | 1 | Chr06:11160066–11162505 (-) | 1.229e-11 | |
| Glyma.07G021100 | hypothetical protein | NA | 1 | Chr07:1647678–1650627 (+) | 2.434e-12 | |
| Glyma.07G021600 | hypothetical protein | AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | 1 | Chr07:1673827–1680014 (-) | 2.434e-12 | |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.234e-13 | |
| Glyma.08G204800 | hypothetical protein | AT3G16140:PSAH-1:photosystem I subunit H-1 | 1 | Chr08:16601039–16602646 (+) | 2.73e-15 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 3.162e-11 | |
| Glyma.09G060200 | hypothetical protein | AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr09:5571201–5579976 (-) | 3.613e-13 | |
| Glyma.11G058500 | hypothetical protein | AT4G37190:AT4G37190:plasma membrane, autoregulation-binding site, misato segment II, myosin-like, tubulin/FtsZ protein | 1 | Chr11:4417029–4423791 (-) | 3.82e-11 | |
| Glyma.11G064300 | hypothetical protein | AT4G36780:BEH2:BES1/BZR1 homolog 2 | 1 | Chr11:4849799–4851673 (+) | 6.283e-11 | |
| Glyma.11G095100 | hypothetical protein | NA | 1 | Chr11:7212438–7214276 (-) | 2.678e-12 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 4.763e-12 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 4.763e-12 | |
| Glyma.12G203300 | hypothetical protein | AT4G03430:EMB2770:pre-mRNA splicing factor-like protein | 1 | Chr12:36371465–36377700 (-) | 1.894e-13 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 5.855e-15 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 3.775e-14 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 6.925e-12 | |
| Glyma.12G205900 | hypothetical protein | NA | 1 | Chr12:36622011–36625824 (+) | 3.877e-11 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 5.479e-13 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 5.479e-13 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 1.017e-13 | |
| Glyma.13G156000 | hypothetical protein | AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 | 1 | Chr13:27104338–27109785 (+) | 4.265e-11 | |
| Glyma.14G067800 | hypothetical protein | AT3G12380:ARP5:actin-related protein 5 | 1 | Chr14:5675792–5680343 (+) | 6.114e-11 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 1.078e-11 | |
| Glyma.15G121100 | hypothetical protein | NA | 1 | Chr15:9567797–9570248 (+) | 2.738e-12 | |
| Glyma.15G121300 | hypothetical protein | AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 | 1 | Chr15:9584685–9590201 (-) | 4.096e-12 | |
| Glyma.15G121500 | hypothetical protein | AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein | 1 | Chr15:9602794–9615281 (+) | 2.738e-12 | |
| Glyma.15G121800 | hypothetical protein | NA | 1 | Chr15:9643746–9648073 (+) | 2.738e-12 | |
| Glyma.16G020200 | hypothetical protein | NA | 1 | Chr16:1828561–1835982 (-) | 7.788e-11 | |
| Glyma.16G118100 | hypothetical protein | AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein | 1 | Chr16:26324650–26336836 (+) | 4.224e-11 | |
| Glyma.16G119400 | hypothetical protein | NA | 1 | Chr16:26684278–26687087 (+) | 1.173e-11 | |
| Glyma.16G120200 | hypothetical protein | AT4G35730:AT4G35730:Regulator of Vps4 activity in the MVB pathway protein | 1 | Chr16:26823772–26828068 (+) | 8.482e-11 | |
| Glyma.17G250700 | hypothetical protein | AT1G75210:AT1G75210:HAD-superfamily hydrolase, subfamily IG, 5'-nucleotidase | 1 | Chr17:40550521–40557680 (+) | 5.534e-11 | |
| Glyma.17G250800 | hypothetical protein | NA | 1 | Chr17:40558554–40564000 (-) | 5.534e-11 | |
| Glyma.17G251200 | hypothetical protein | NA | 1 | Chr17:40605249–40607536 (+) | 6.444e-12 | |
| Glyma.17G251800 | hypothetical protein | NA | 1 | Chr17:40633579–40636068 (+) | 6.692e-11 | |
| Glyma.17G251900 | hypothetical protein | AT1G19600:AT1G19600:pfkB-like carbohydrate kinase family protein | 1 | Chr17:40641019–40644794 (+) | 6.692e-11 | |
| Glyma.18G003300 | hypothetical protein | NA | 1 | Chr18:276941–280909 (+) | 9.631e-13 | |
| Glyma.19G005200 | hypothetical protein | AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein | 1 | Chr19:472201–476152 (-) | 7.774e-12 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 1 | Chr19:1123637–1130946 (+) | 1.674e-12 | |
| Glyma.19G128100 | hypothetical protein | NA | 1 | Chr19:38728037–38732422 (+) | 7.683e-11 | |
| Glyma.19G128200 | hypothetical protein | NA | 1 | Chr19:38739769–38743404 (+) | 2.884e-13 | |
| Glyma.19G150000 | hypothetical protein | AT3G58060:AT3G58060:Cation efflux family protein | 1 | Chr19:41018746–41025024 (+) | 1.799e-12 |