P22608
Metabolite ID
P22608
Deionized mass
409.6797 Da
Average m/z
410.6861
Average RT
13.9066
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
127
GWAS result file
Available
Candidate annotations
Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations
GWAS Evidence
Dataset: indexed GWAS records.
SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.
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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage
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Associated genes
127 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.
| Gene ID | Alias | Description | Arabidopsis ortholog | Supporting SNP records | Gene interval (1-based) | Minimum P |
|---|---|---|---|---|---|---|
| Glyma.19G027000 | hypothetical protein | NA | 4 | Chr19:3335896–3343744 (+) | 1.505e-12 | |
| Glyma.03G023000 | hypothetical protein | AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein | 3 | Chr03:2423540–2428634 (-) | 1.41e-20 | |
| Glyma.19G011800 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 3 | Chr19:1134716–1143232 (+) | 4.069e-11 | |
| Glyma.02G188300 | hypothetical protein | NA | 2 | Chr02:35008552–35027979 (-) | 9.125e-12 | |
| Glyma.06G183500 | hypothetical protein | AT5G50000:AT5G50000:Protein kinase superfamily protein | 2 | Chr06:15828917–15834067 (+) | 1.081e-11 | |
| Glyma.06G315100 | hypothetical protein | AT5G04930:ALA1:aminophospholipid ATPase 1 | 2 | Chr06:50401945–50408153 (+) | 6.26e-13 | |
| Glyma.10G081700 | hypothetical protein | NA | 2 | Chr10:9752508–9758422 (+) | 1.516e-13 | |
| Glyma.12G203700 | hypothetical protein | AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase | 2 | Chr12:36406747–36413696 (+) | 7.42e-12 | |
| Glyma.12G204400 | hypothetical protein | AT4G03560:TPC1:two-pore channel 1 | 2 | Chr12:36473422–36498915 (+) | 1.904e-13 | |
| Glyma.13G135700 | hypothetical protein | NA | 2 | Chr13:24812720–24818735 (+) | 8.121e-13 | |
| Glyma.13G135800 | hypothetical protein | AT5G02800:CDL1:Protein kinase superfamily protein | 2 | Chr13:24820151–24823999 (-) | 8.121e-13 | |
| Glyma.19G011700 | hypothetical protein | AT3G01420:DOX1:Peroxidase superfamily protein | 2 | Chr19:1123637–1130946 (+) | 2.166e-11 | |
| Glyma.19G026600 | hypothetical protein | AT4G13700:PAP23:purple acid phosphatase 23 | 2 | Chr19:3303658–3312907 (-) | 1.505e-12 | |
| Glyma.01G034700 | hypothetical protein | NA | 1 | Chr01:3599923–3602578 (-) | 9.189e-11 | |
| Glyma.01G099100 | hypothetical protein | NA | 1 | Chr01:33017228–33023840 (+) | 5.381e-11 | |
| Glyma.01G099600 | hypothetical protein | AT3G53930:AT3G53930:Protein kinase superfamily protein__AT2G37840:AT2G37840:Protein kinase superfamily protein | 1 | Chr01:33115843–33125726 (-) | 5.381e-11 | |
| Glyma.01G099900 | hypothetical protein | NA | 1 | Chr01:33275414–33282430 (+) | 5.381e-11 | |
| Glyma.01G173900 | hypothetical protein | NA | 1 | Chr01:51092004–51094319 (+) | 5.132e-11 | |
| Glyma.01G174300 | hypothetical protein | NA | 1 | Chr01:51115502–51120201 (+) | 2.406e-11 | |
| Glyma.01G174600 | hypothetical protein | AT5G66740:AT5G66740:spindle assembly abnormal protein (DUF620) | 1 | Chr01:51138854–51141103 (+) | 2.406e-11 | |
| Glyma.02G151500 | hypothetical protein | AT2G47990:SWA1:transducin family protein / WD-40 repeat family protein | 1 | Chr02:15586732–15588774 (+) | 2.674e-11 | |
| Glyma.02G205300 | hypothetical protein | NA | 1 | Chr02:39037472–39038396 (-) | 4.274e-11 | |
| Glyma.03G021700 | hypothetical protein | AT2G45490:AUR3:ataurora3 | 1 | Chr03:2248429–2251737 (+) | 3.019e-11 | |
| Glyma.03G022100 | hypothetical protein | AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein | 1 | Chr03:2301675–2307263 (+) | 3.541e-13 | |
| Glyma.03G022900 | hypothetical protein | NA | 1 | Chr03:2409690–2420328 (-) | 4.571e-11 | |
| Glyma.03G031700 | hypothetical protein | AT1G79600:AT1G79600:Protein kinase superfamily protein | 1 | Chr03:3567906–3572939 (-) | 1.079e-13 | |
| Glyma.03G035500 | hypothetical protein | NA | 1 | Chr03:4289118–4294184 (+) | 1.889e-11 | |
| Glyma.03G177700 | hypothetical protein | NA | 1 | Chr03:39046772–39051158 (+) | 8.729e-12 | |
| Glyma.04G086600 | hypothetical protein | NA | 1 | Chr04:7374806–7380808 (+) | 1.973e-11 | |
| Glyma.04G104400 | hypothetical protein | NA | 1 | Chr04:9885009–9889282 (+) | 3.723e-14 | |
| Glyma.04G112200 | hypothetical protein | AT5G51750:SBT1.3:subtilase 1.3 | 1 | Chr04:12562882–12565006 (+) | 1.79e-11 | |
| Glyma.04G190200 | hypothetical protein | AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 | 1 | Chr04:46086785–46089618 (-) | 2.882e-11 | |
| Glyma.04G192000 | hypothetical protein | AT3G48430:REF6:relative of early flowering 6 | 1 | Chr04:46279239–46297477 (-) | 1.417e-11 | |
| Glyma.05G124700 | hypothetical protein | NA | 1 | Chr05:31807311–31817648 (+) | 2.794e-12 | |
| Glyma.05G126400 | hypothetical protein | NA | 1 | Chr05:31961493–31968339 (+) | 3.919e-13 | |
| Glyma.05G127200 | hypothetical protein | AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | 1 | Chr05:32014213–32017922 (-) | 2.389e-15 | |
| Glyma.05G127300 | hypothetical protein | AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B | 1 | Chr05:32021521–32025767 (-) | 3.61e-15 | |
| Glyma.05G127400 | hypothetical protein | AT1G29850:AT1G29850:double-stranded DNA-binding family protein | 1 | Chr05:32030115–32033716 (+) | 3.61e-15 | |
| Glyma.05G127500 | hypothetical protein | NA | 1 | Chr05:32041345–32049554 (+) | 4.402e-13 | |
| Glyma.05G127800 | hypothetical protein | AT4G18240:SS4:starch synthase 4 | 1 | Chr05:32125404–32138244 (+) | 5.685e-13 | |
| Glyma.05G127900 | SAD1 | AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein | 1 | Chr05:32139620–32141770 (-) | 5.685e-13 | |
| Glyma.05G128200 | hypothetical protein | AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein | 1 | Chr05:32158034–32162343 (-) | 5.685e-13 | |
| Glyma.05G219200 | hypothetical protein | NA | 1 | Chr05:39875137–39879113 (-) | 4.208e-11 | |
| Glyma.05G236400 | hypothetical protein | AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 | 1 | Chr05:41274513–41279615 (-) | 1.199e-17 | |
| Glyma.05G236700 | hypothetical protein | AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein | 1 | Chr05:41301540–41310727 (+) | 1.408e-16 | |
| Glyma.05G237800 | hypothetical protein | AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 | 1 | Chr05:41406807–41413022 (-) | 2.126e-12 | |
| Glyma.06G019800 | hypothetical protein | NA | 1 | Chr06:1494230–1501925 (+) | 1.637e-12 | |
| Glyma.06G125200 | hypothetical protein | AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 | 1 | Chr06:10209787–10215982 (+) | 3.692e-13 | |
| Glyma.06G125300 | hypothetical protein | AT5G24105:AGP41:arabinogalactan protein 41 | 1 | Chr06:10216506–10218901 (-) | 3.692e-13 | |
| Glyma.06G126900 | hypothetical protein | AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) | 1 | Chr06:10403126–10408307 (-) | 4.918e-12 | |
| Glyma.06G261900 | hypothetical protein | NA | 1 | Chr06:44875369–44879702 (-) | 3.926e-11 | |
| Glyma.06G316500 | hypothetical protein | AT2G47420:DIM1A:Ribosomal RNA adenine dimethylase family protein | 1 | Chr06:50531222–50538652 (-) | 1.86e-12 | |
| Glyma.06G317100 | hypothetical protein | AT5G61520:AT5G61520:Major facilitator superfamily protein | 1 | Chr06:50586679–50589765 (+) | 8.209e-11 | |
| Glyma.07G013400 | hypothetical protein | AT3G21310:AT3G21310:Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein | 1 | Chr07:1028243–1033837 (-) | 1.022e-11 | |
| Glyma.07G013500 | hypothetical protein | NA | 1 | Chr07:1036819–1041984 (-) | 1.022e-11 | |
| Glyma.07G021100 | hypothetical protein | NA | 1 | Chr07:1647678–1650627 (+) | 9.577e-11 | |
| Glyma.07G021600 | hypothetical protein | AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase | 1 | Chr07:1673827–1680014 (-) | 9.577e-11 | |
| Glyma.07G021800 | hypothetical protein | AT1G80920:J8:Chaperone DnaJ-domain superfamily protein | 1 | Chr07:1697119–1698666 (+) | 2.056e-11 | |
| Glyma.07G091400 | COL21 | CONSTANS-like zinc finger protein | AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein | 1 | Chr07:8539101–8547001 (+) | 6.438e-13 |
| Glyma.08G016700 | hypothetical protein | AT1G63840:AT1G63840:RING/U-box superfamily protein | 1 | Chr08:1330226–1331366 (-) | 1.608e-16 | |
| Glyma.08G114700 | hypothetical protein | AT3G13600:AT3G13600:calmodulin-binding family protein | 1 | Chr08:8768854–8772973 (-) | 7.281e-11 | |
| Glyma.08G114800 | hypothetical protein | AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein | 1 | Chr08:8792663–8798214 (-) | 7.291e-11 | |
| Glyma.08G122000 | hypothetical protein | AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein | 1 | Chr08:9397717–9410004 (+) | 4.086e-11 | |
| Glyma.09G012200 | hypothetical protein | AT2G35760:AT2G35760:Uncharacterized protein family (UPF0497) | 1 | Chr09:937048–940244 (+) | 3.131e-11 | |
| Glyma.09G016500 | hypothetical protein | NA | 1 | Chr09:1274652–1276853 (-) | 3.062e-14 | |
| Glyma.09G016800 | hypothetical protein | NA | 1 | Chr09:1300913–1311894 (+) | 5.556e-14 | |
| Glyma.09G052700 | hypothetical protein | AT1G31120:KUP10:K+ uptake permease 10 | 1 | Chr09:4617652–4626364 (+) | 4.98e-12 | |
| Glyma.09G060200 | hypothetical protein | AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 1 | Chr09:5571201–5579976 (-) | 5.487e-13 | |
| Glyma.09G082000 | hypothetical protein | NA | 1 | Chr09:9638564–9650178 (+) | 4.965e-13 | |
| Glyma.09G084300 | hypothetical protein | AT2G34680:AIR9:Outer arm dynein light chain 1 protein | 1 | Chr09:10129602–10197250 (-) | 7.626e-12 | |
| Glyma.09G177400 | hypothetical protein | NA | 1 | Chr09:40183616–40184826 (-) | 9.071e-11 | |
| Glyma.09G186700 | hypothetical protein | AT1G20050:HYD1:C-8,7 sterol isomerase | 1 | Chr09:41147591–41150204 (+) | 2.248e-11 | |
| Glyma.09G268900 | hypothetical protein | NA | 1 | Chr09:48638803–48644136 (+) | 3.789e-12 | |
| Glyma.09G269100 | hypothetical protein | NA | 1 | Chr09:48651429–48653656 (-) | 6.347e-11 | |
| Glyma.09G270200 | hypothetical protein | AT5G01020:AT5G01020:Protein kinase superfamily protein | 1 | Chr09:48725417–48728520 (-) | 6.392e-11 | |
| Glyma.10G078700 | hypothetical protein | NA | 1 | Chr10:8882318–8903950 (+) | 7.334e-13 | |
| Glyma.10G079100 | hypothetical protein | NA | 1 | Chr10:8960669–8962364 (-) | 7.334e-13 | |
| Glyma.10G079800 | hypothetical protein | NA | 1 | Chr10:9223520–9228511 (-) | 7.334e-13 | |
| Glyma.10G080000 | hypothetical protein | AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… | 1 | Chr10:9258476–9260697 (-) | 7.334e-13 | |
| Glyma.10G081200 | hypothetical protein | NA | 1 | Chr10:9600771–9603988 (-) | 2.95e-13 | |
| Glyma.10G265400 | hypothetical protein | AT2G01290:RPI2: | 1 | Chr10:48921268–48922795 (+) | 2.081e-12 | |
| Glyma.11G110300 | hypothetical protein | AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… | 1 | Chr11:8402144–8406496 (-) | 1.39e-12 | |
| Glyma.11G127100 | hypothetical protein | AT1G06040:STO:B-box zinc finger family protein | 1 | Chr11:9656242–9659517 (+) | 1.054e-11 | |
| Glyma.11G127200 | hypothetical protein | AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein | 1 | Chr11:9660434–9665570 (-) | 1.054e-11 | |
| Glyma.11G127300 | hypothetical protein | AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein | 1 | Chr11:9667918–9671917 (-) | 1.054e-11 | |
| Glyma.11G154900 | PRP3 | NA | 1 | Chr11:12643089–12645488 (+) | 1.11e-11 | |
| Glyma.11G179000 | hypothetical protein | AT2G27230:LHW:transcription factor-like protein | 1 | Chr11:24412040–24417199 (+) | 2.723e-11 | |
| Glyma.11G182600 | hypothetical protein | AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein | 1 | Chr11:24998933–25003549 (-) | 2.264e-11 | |
| Glyma.11G182700 | hypothetical protein | AT1G32250:AT1G32250:Calcium-binding EF-hand family protein | 1 | Chr11:25028353–25031056 (-) | 5.646e-11 | |
| Glyma.11G240600 | hypothetical protein | NA | 1 | Chr11:33491895–33493311 (+) | 9.219e-12 | |
| Glyma.12G008300 | hypothetical protein | AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein | 1 | Chr12:613939–617457 (+) | 2.523e-11 | |
| Glyma.12G108600 | hypothetical protein | NA | 1 | Chr12:9994609–9997302 (-) | 3.602e-14 | |
| Glyma.12G109500 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:10308026–10314332 (-) | 3.602e-14 | |
| Glyma.12G114500 | hypothetical protein | AT4G22930:PYR4:pyrimidin 4 | 1 | Chr12:11396572–11400825 (-) | 6.056e-11 | |
| Glyma.12G114900 | hypothetical protein | NA | 1 | Chr12:11457987–11462951 (-) | 6.056e-11 | |
| Glyma.12G202200 | hypothetical protein | AT2G20860:LIP1:lipoic acid synthase 1 | 1 | Chr12:36267599–36271584 (+) | 5.743e-13 | |
| Glyma.12G202300 | hypothetical protein | NA | 1 | Chr12:36275438–36276838 (+) | 5.743e-13 | |
| Glyma.12G202400 | hypothetical protein | AT4G03415:PP2C52:Protein phosphatase 2C family protein | 1 | Chr12:36289704–36295084 (-) | 6.111e-12 | |
| Glyma.12G203300 | hypothetical protein | AT4G03430:EMB2770:pre-mRNA splicing factor-like protein | 1 | Chr12:36371465–36377700 (-) | 1.595e-11 | |
| Glyma.12G203600 | EXPB8 | AT2G20750:EXPB1:expansin B1 | 1 | Chr12:36390283–36394245 (-) | 1.057e-12 | |
| Glyma.12G204000 | hypothetical protein | AT1G03687:AT1G03687:DTW domain-containing protein | 1 | Chr12:36428558–36432835 (+) | 1.904e-13 | |
| Glyma.12G204600 | hypothetical protein | AT4G28310:AT4G28310:microtubule-associated protein | 1 | Chr12:36504234–36505245 (+) | 2.296e-11 | |
| Glyma.13G095000 | hypothetical protein | NA | 1 | Chr13:21005327–21006774 (-) | 6.903e-17 | |
| Glyma.13G135300 | hypothetical protein | NA | 1 | Chr13:24770681–24773826 (+) | 1.54e-11 | |
| Glyma.13G135400 | hypothetical protein | AT5G12130:PDE149:integral membrane TerC family protein | 1 | Chr13:24786242–24791938 (+) | 1.541e-11 | |
| Glyma.13G135500 | hypothetical protein | AT5G02780:GSTL1:glutathione transferase lambda 1 | 1 | Chr13:24798567–24801567 (+) | 8.121e-13 | |
| Glyma.14G069500 | hypothetical protein | AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 | 1 | Chr14:5822246–5825628 (-) | 3.781e-13 | |
| Glyma.15G124000 | hypothetical protein | NA | 1 | Chr15:9845097–9849312 (-) | 1.198e-12 | |
| Glyma.15G124500 | MLO-like protein 13 | AT4G24250:MLO13:Seven transmembrane MLO family protein | 1 | Chr15:9888761–9894068 (-) | 6.839e-12 | |
| Glyma.16G121500 | hypothetical protein | NA | 1 | Chr16:27007186–27010856 (+) | 3.41e-11 | |
| Glyma.16G139500 | hypothetical protein | AT5G66550:AT5G66550:Maf-like protein | 1 | Chr16:29686243–29690410 (-) | 4.584e-11 | |
| Glyma.16G145100 | hypothetical protein | NA | 1 | Chr16:30578388–30581421 (-) | 5.271e-11 | |
| Glyma.16G145600 | hypothetical protein | AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… | 1 | Chr16:30652378–30659548 (+) | 5.271e-11 | |
| Glyma.18G251000 | hypothetical protein | NA | 1 | Chr18:53738009–53740714 (+) | 1.84e-11 | |
| Glyma.18G251900 | hypothetical protein | AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… | 1 | Chr18:53855786–53862322 (-) | 6.508e-12 | |
| Glyma.18G263900 | hypothetical protein | AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein | 1 | Chr18:54907058–54912936 (-) | 3.442e-12 | |
| Glyma.18G266100 | hypothetical protein | NA | 1 | Chr18:55052591–55056489 (-) | 5.178e-11 | |
| Glyma.18G299100 | hypothetical protein | AT5G13420:TRA2:Aldolase-type TIM barrel family protein | 1 | Chr18:57674222–57678396 (+) | 6.759e-12 | |
| Glyma.19G011600 | hypothetical protein | NA | 1 | Chr19:1111789–1116419 (+) | 2.225e-11 | |
| Glyma.19G012100 | hypothetical protein | AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 | 1 | Chr19:1155711–1161298 (-) | 4.812e-16 | |
| Glyma.19G012300 | hypothetical protein | NA | 1 | Chr19:1165111–1173031 (-) | 4.812e-16 | |
| Glyma.19G218100 | hypothetical protein | AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 | 1 | Chr19:47082133–47085750 (+) | 1.198e-15 | |
| Glyma.20G019800 | hypothetical protein | AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein | 1 | Chr20:2051817–2057262 (+) | 3.362e-12 | |
| Glyma.20G099200 | hypothetical protein | AT3G55410:AT3G55410:2-oxoglutarate dehydrogenase, E1 component__AT5G65750:AT5G65750:2-oxoglutarate dehydrogenase, E1 co… | 1 | Chr20:34242852–34248956 (-) | 5.638e-11 | |
| Glyma.20G107200 | hypothetical protein | AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein | 1 | Chr20:34984922–34988496 (+) | 1.577e-11 | |
| Glyma.20G107700 | hypothetical protein | AT2G16860:AT2G16860:GCIP-interacting family protein | 1 | Chr20:35033414–35036538 (+) | 6.045e-11 | |
| Glyma.20G222800 | hypothetical protein | AT3G04760:AT3G04760:Pentatricopeptide repeat (PPR-like) superfamily protein | 1 | Chr20:45748122–45750353 (+) | 4.447e-12 |