SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.02G107400

Description hypothetical protein

Gene interval Chr02:10245905–10246706 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features157Overlap
Maximum supporting SNP records1
Features with ≥2 supporting SNP records0

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

157 matching features · page 10 of 16

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P28399 PA(18:1(12Z)-2OH(9,10)/2:0) 510.2602 12.153e-13
P28904 Luteolin 7-(2''-glucosyllactate) 520.1133 18.23e-12
P28973 Dendrodoine 272.0744 12.991e-12
P29119 Validamycin E 659.2616 12.795e-11
P29692 No candidate annotation 1040.3742 12.488e-11
P29775 Galangin 5-methyl ether 284.0665 13.417e-11
P29915 6-Formyl-2,3,3a,4,5,8,9,11a-octahydro-10-(hydroxymethyl)-3-methylene-4-(2-methyl-1-oxobutoxy)-2-oxocyclodeca[b]furan-5-yl ester hexadecanoic acid 616.3901 16.419e-11
P29928 PGP(i-19:0/20:4(8Z,11Z,14Z,17Z)-2OH(5S,6R)) 924.5121 14.366e-11
P29964 No candidate annotation 599.3859 11.463e-11
P30028 PI(22:6(4Z,7Z,10Z,13Z,16Z,19Z)/20:4(5Z,8Z,11Z,13E)+=O(15)) 944.5089 16.227e-11