Overview Annotation GWAS Evidence Associated genes

P29928

Metabolite ID
P29928
Deionized mass
924.5121 Da
Average m/z
925.5112
Average RT
15.9051
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
6
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

6 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G246500 hypothetical protein AT5G49570:PNG1:peptide-N-glycanase 1 2Chr03:44341465–44350438 (-)3.178e-11
Glyma.01G161200 hypothetical protein AT4G35750:AT4G35750:SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein 1Chr01:49945683–49947759 (-)4.999e-11
Glyma.02G107400 hypothetical protein NA 1Chr02:10245905–10246706 (-)4.366e-11
Glyma.02G107900 hypothetical protein AT2G02990:RNS1:ribonuclease 1 1Chr02:10303196–10305744 (+)2.97e-11
Glyma.03G246600 hypothetical protein NA 1Chr03:44355048–44357092 (+)3.178e-11
Glyma.08G314100 hypothetical protein NA 1Chr08:43419404–43433718 (-)3.194e-11