SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G173900

Description hypothetical protein

Gene interval Chr01:51092004–51094319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

Explore research resources ↓
Associated metabolite features320Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0125.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

320 matching features · page 5 of 32

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P06291 Veratrole 138.0669 15.059e-11
P06357 2-Polyprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone 304.1690 14.128e-13
P06610 Limazepine B1 290.1249 13.398e-13
P06628 6-Amino-5-nitro-4-imino-beta-D-ribofuranosylpyrimidine. 287.0844 19.981e-11
P06792 Myo-inositol glutamate 323.0859 16.351e-11
P06840 13-Hydroxypalmatine 367.1410 12.307e-12
P06881 No candidate annotation 697.2884 14.954e-11
P06888 Ethotoin 204.0868 19.9e-11
P06891 2,5-Dimethylfuran 96.0572 16.117e-13
P06948 L-Noradrenaline 169.0729 11.575e-11