SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G173900

Description hypothetical protein

Gene interval Chr01:51092004–51094319 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features320Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records4

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.0125.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

320 matching features · page 31 of 32

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P47211 [4-((1Z)-2-(Acetylamino)-3-{[1-(1,1'-biphenyl-4-ylmethyl)-2-oxoazepan-3-YL]amino}-3-oxoprop-1-enyl)-2-formylphenyl]acetic acid 567.2412 18.61e-12
P47221 (3S,3'S,6'R)-3'-[(3S,4S)-9-ethenyl-14-ethyl-4,8,13,18-tetramethyl-20-oxo-3-phorbinepropanoate]-beta,epsilon-Carotene-3,3'-diol 1084.6664 11.02e-11
P47867 alpha-Calacorene 200.1555 12.011e-12
P48136 1,4,10,13-Tetraoxa-7,16-diazacyclooctadecane 262.1896 14.244e-14
P48138 N-Stearoyl Asparagine 398.3115 16.098e-11
P49100 Glucoerysodine 461.2087 17.125e-11
P49223 QUINGESTANOL 366.2557 11.709e-11
P49988 Rifamycin W-hemiacetal 653.2891 15.066e-12
P50051 No candidate annotation 187.1442 16.132e-11
P50192 No candidate annotation 727.3025 16.737e-12