Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P47867

Metabolite ID
P47867
Deionized mass
200.1555 Da
Average m/z
201.1615
Average RT
24.9590
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
44
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

44 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G188300 hypothetical protein NA 2Chr02:35008552–35027979 (-)1.006e-12
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 2Chr09:6509441–6524102 (+)3.491e-11
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)6.877e-11
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)7.696e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)7.242e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)7.242e-11
Glyma.01G173900 hypothetical protein NA 1Chr01:51092004–51094319 (+)2.011e-12
Glyma.01G176400 hypothetical protein AT1G63810:AT1G63810:nucleolar protein 1Chr01:51285599–51295173 (-)2.108e-11
Glyma.01G222700 hypothetical protein AT1G64060:RBOH F:respiratory burst oxidase protein F 1Chr01:55163018–55172994 (+)5.799e-11
Glyma.01G223200 hypothetical protein AT4G23650:CDPK6:calcium-dependent protein kinase 6 1Chr01:55204517–55209774 (-)1.619e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.082e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)9.325e-11
Glyma.09G011700 hypothetical protein NA 1Chr09:894858–897607 (-)3.083e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)4.002e-11
Glyma.09G067600 hypothetical protein NA 1Chr09:6804057–6804365 (+)3.751e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.319e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)4.797e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)7.607e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)5.344e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)8.703e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)7.343e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)1.044e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.321e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.321e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.321e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.321e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.175e-11
Glyma.16G013900 hypothetical protein AT1G17290:AlaAT1:alanine aminotransferas 1Chr16:1208240–1214310 (-)9.458e-11
Glyma.16G014100 hypothetical protein AT1G53830:PME2:pectin methylesterase 2 1Chr16:1222829–1228462 (-)9.458e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)1.534e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)3.931e-12
Glyma.16G024600 hypothetical protein AT1G01320:AT1G01320:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:2374161–2391216 (-)5.811e-13
Glyma.16G024700 hypothetical protein NA 1Chr16:2403095–2406034 (+)1.636e-11
Glyma.16G024800 hypothetical protein AT4G31010:AT4G31010:RNA-binding CRS1 / YhbY (CRM) domain-containing protein 1Chr16:2407161–2410997 (-)1.159e-14
Glyma.16G025000 hypothetical protein AT3G61730:RMF:reduced male fertility__AT5G36000:AT5G36000:F-box protein RMF 1Chr16:2422720–2426701 (+)1.636e-11
Glyma.16G115800 hypothetical protein NA 1Chr16:25719040–25728740 (-)4.319e-12
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)4.07e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)9.167e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)4.664e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)5.342e-11
Glyma.20G093400 hypothetical protein NA 1Chr20:33659090–33667768 (+)4.939e-11
Glyma.20G094300 hypothetical protein NA 1Chr20:33753229–33754924 (-)8.904e-12
Glyma.20G094400 hypothetical protein AT5G02270:ABCI20:non-intrinsic ABC protein 9 1Chr20:33754119–33755970 (-)8.904e-12
Glyma.20G094500 hypothetical protein NA 1Chr20:33759417–33761555 (-)8.904e-12