SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.01G045600

Description hypothetical protein

Gene interval Chr01:5242432–5245038 (-), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features669Overlap
Maximum supporting SNP records3
Features with ≥2 supporting SNP records560

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 2.4738.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

669 matching features · page 12 of 67

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P12935 No candidate annotation 611.1600 31.354e-12
P13122 No candidate annotation 688.8638 32.355e-11
P13148 No candidate annotation 458.5730 34.871e-13
P13231 Atromentin 324.0635 32.063e-13
P13409 No candidate annotation 706.1236 32.859e-13
P13413 (4-Ethylnaphthalen-1-yl)[1-(5-fluoropentyl)-1H-indol-3-yl]methanone 387.2022 31.171e-12
P13641 No candidate annotation 612.0937 31.035e-14
P13883 Kaempferol 3-O-caffeoyl-sophoroside 7-O-glucoside 934.2391 31.764e-11
P13935 Malvidin 3-glucoside-5-(6-acetylglucoside) 698.1805 34.203e-11
P13994 2-Methyl-1-hydroxypropyl-ThPP 496.0955 32.265e-12