Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P46787

Metabolite ID
P46787
Deionized mass
610.3070 Da
Average m/z
611.3142
Average RT
24.3238
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
45
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

45 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.128e-12
Glyma.05G149900 hypothetical protein NA 2Chr05:34389242–34393621 (-)2.393e-13
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)6.036e-13
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.128e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)5.729e-13
Glyma.01G037200 hypothetical protein NA 1Chr01:3946315–3948100 (-)9.487e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)2.054e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)2.967e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)5.415e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)7.764e-12
Glyma.05G149200 hypothetical protein NA 1Chr05:34347910–34353885 (-)4.909e-11
Glyma.05G149300 hypothetical protein AT2G03870:EMB2816:Small nuclear ribonucleoprotein family protein 1Chr05:34357418–34361032 (-)2.392e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.326e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.287e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.185e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.185e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.185e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.696e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.234e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.603e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)6.999e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)6.999e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)6.999e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)6.999e-12
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)7.001e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.497e-12
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)7.001e-13
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.707e-12
Glyma.11G037100 hypothetical protein AT2G35660:CTF2A:FAD/NAD(P)-binding oxidoreductase family protein 1Chr11:2678678–2681764 (-)3.633e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)4.045e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)4.045e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)4.045e-11
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)1.061e-11
Glyma.14G205100 hypothetical protein NA 1Chr14:47020646–47026852 (+)4.344e-12
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.362e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)9.472e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.362e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.362e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.668e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.719e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.084e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.603e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.376e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.376e-12
Glyma.19G144200 hypothetical protein AT2G42280:FBH4:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr19:40545843–40548762 (+)3.133e-11