Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P45349

Metabolite ID
P45349
Deionized mass
706.2932 Da
Average m/z
707.3037
Average RT
23.2640
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.01G166400 hypothetical protein AT4G36080:AT4G36080:phosphotransferases/inositol or phosphatidylinositol kinase 4Chr01:50404781–50436297 (-)3.676e-11
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.5e-14
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.501e-12
Glyma.14G171400 hypothetical protein NA 2Chr14:42398866–42404627 (+)4.138e-11
Glyma.16G031600 hypothetical protein NA 2Chr16:2964569–2985013 (+)2.48e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.5e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.775e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)4.54e-11
Glyma.01G166300 hypothetical protein AT3G51230:AT3G51230:chalcone-flavanone isomerase family protein 1Chr01:50402188–50404181 (+)6.754e-11
Glyma.01G166600 hypothetical protein AT2G18000:TAF14:TBP-associated factor 14 1Chr01:50443699–50446896 (-)6.754e-11
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.647e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.647e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.745e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)9.091e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.362e-11
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)4.341e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)4.805e-12
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)3.386e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)3.386e-11
Glyma.08G330600 hypothetical protein NA 1Chr08:44828516–44836550 (-)1.085e-11
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.961e-13
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)2.558e-11
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)1.021e-14
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.459e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.849e-16
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.533e-15
Glyma.10G217500 hypothetical protein AT1G71980:AT1G71980:Protease-associated (PA) RING/U-box zinc finger family protein__AT1G22670:AT1G22670:Protease-associ… 1Chr10:44919091–44924920 (-)1.951e-11
Glyma.10G217800 hypothetical protein NA 1Chr10:44944812–44948539 (-)1.951e-11
Glyma.10G217900 SUT1 sucrose transporter AT1G22710:SUC2:sucrose-proton symporter 2__AT1G66570:SUC7:sucrose-proton symporter 7__AT2G14670:SUC8:sucrose-proton sym… 1Chr10:44953802–44957372 (-)1.951e-11
Glyma.10G229600 hypothetical protein AT4G23630:BTI1:VIRB2-interacting protein 1 1Chr10:45968793–45973482 (-)3.255e-12
Glyma.10G233200 hypothetical protein NA 1Chr10:46244187–46249491 (-)1.941e-13
Glyma.10G233700 hypothetical protein AT3G49050:AT3G49050:alpha/beta-Hydrolases superfamily protein 1Chr10:46285252–46289700 (-)1.941e-13
Glyma.10G234300 hypothetical protein NA 1Chr10:46335347–46337197 (-)1.854e-11
Glyma.10G236000 hypothetical protein NA 1Chr10:46499079–46501955 (-)4.768e-11
Glyma.10G236100 hypothetical protein AT5G52280:AT5G52280:Myosin heavy chain-related protein 1Chr10:46503152–46510614 (-)4.768e-11
Glyma.10G236800 hypothetical protein NA 1Chr10:46559759–46563487 (+)4.768e-11
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)1.619e-12
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)1.619e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.045e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.045e-11
Glyma.14G171200 hypothetical protein AT1G19970:AT1G19970:ER lumen protein retaining receptor family protein 1Chr14:42387905–42389129 (+)4.138e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.364e-11
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)7.302e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.025e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.778e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.778e-12
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)8.178e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.297e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.297e-11
Glyma.19G030100 hypothetical protein NA 1Chr19:3732644–3733945 (+)2.172e-11
Glyma.19G030500 GmAT133 NA 1Chr19:3779017–3781453 (-)2.172e-11
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 1Chr19:3839225–3845784 (-)2.306e-11
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)2.079e-12
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)4.28e-13