Overview Annotation GWAS Evidence Associated genes

P45062

Metabolite ID
P45062
Deionized mass
214.1328 Da
Average m/z
215.1400
Average RT
23.0340
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
147
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

147 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G196900 hypothetical protein NA 4Chr16:35841279–35846894 (-)3.469e-12
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)7.459e-13
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.368e-14
Glyma.19G037200 hypothetical protein AT5G15680:AT5G15680:ARM repeat superfamily protein 4Chr19:5178930–5212367 (+)3.198e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)8.532e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)5.998e-11
Glyma.16G180100 hypothetical protein NA 3Chr16:34070806–34076053 (+)2.267e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 2Chr05:32021521–32025767 (-)9.848e-17
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)1.449e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.447e-16
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)5.359e-15
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)9.642e-14
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)9.642e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.881e-12
Glyma.16G145100 hypothetical protein NA 2Chr16:30578388–30581421 (-)2.265e-14
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 2Chr16:30652378–30659548 (+)2.265e-14
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)2.578e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 2Chr19:472201–476152 (-)1.502e-16
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.368e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.131e-14
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)4.624e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)3.09e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.239e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)8.429e-12
Glyma.01G167600 hypothetical protein AT5G66290:AT5G66290:uncharacterized protein 1Chr01:50524157–50528111 (-)3.201e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)3.785e-12
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)3.785e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)1.596e-14
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)9.061e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)4.547e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.078e-12
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)1.422e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.104e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)6.511e-11
Glyma.04G044600 hypothetical protein NA 1Chr04:3556928–3559705 (-)9.209e-12
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)1.175e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)3.698e-16
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)3.698e-16
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)3.698e-16
Glyma.04G237700 hypothetical protein NA 1Chr04:50614236–50619957 (+)5.691e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.48e-16
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)2.325e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)4.286e-14
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)9.848e-17
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.245e-20
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.026e-20
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.026e-20
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.026e-20
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.853e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5.992e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)5.479e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)6.721e-17
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)6.348e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)8.532e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)8.532e-11
Glyma.07G080900 hypothetical protein NA 1Chr07:7381339–7405785 (+)6.416e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.742e-14
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)7.678e-13
Glyma.09G052700 hypothetical protein AT1G31120:KUP10:K+ uptake permease 10 1Chr09:4617652–4626364 (+)1.124e-14
Glyma.09G056400 hypothetical protein NA 1Chr09:5080364–5088515 (-)8.927e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)7.914e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)5.747e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)6.884e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)5.984e-11
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)1.289e-14
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)8.607e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)8.609e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.927e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.927e-12
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)8.753e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.816e-16
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)5.359e-15
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)8.238e-13
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.331e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)2.626e-13
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)2.626e-13
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)9.642e-14
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)2.335e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)1.879e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)8.066e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)9.234e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.448e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)9.234e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)9.234e-15
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.815e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.854e-11
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)4.111e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.048e-13
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)4.663e-11
Glyma.16G020900 hypothetical protein NA 1Chr16:1932165–1935289 (-)4.992e-12
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)1.863e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)3.05e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)5.998e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)5.998e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)5.998e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)5.998e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)4.566e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.22e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)4.725e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)6.484e-11
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)2.989e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.2e-12
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)3.07e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)2.948e-12
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)3.536e-13
Glyma.16G145400 hypothetical protein AT3G12090:TET6:tetraspanin6 1Chr16:30624348–30627475 (+)1.185e-11
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)2.874e-12
Glyma.16G167800 hypothetical protein AT1G03190:UVH6:RAD3-like DNA-binding helicase protein 1Chr16:32772162–32778480 (+)1.19e-11
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)8.517e-12
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)3.006e-11
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)5.354e-11
Glyma.16G209000 hypothetical protein NA 1Chr16:36841786–36845498 (-)2.363e-11
Glyma.16G209400 hypothetical protein AT1G17840:ABCG11:white-brown complex-like protein 1Chr16:36871978–36878151 (-)3.158e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.743e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.743e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)7.805e-11
Glyma.17G251200 hypothetical protein NA 1Chr17:40605249–40607536 (+)9.081e-13
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr18:4503897–4512049 (+)5.347e-11
Glyma.18G108400 hypothetical protein NA 1Chr18:12370997–12390275 (-)9.309e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)1.044e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.739e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)8.361e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)1.88e-13
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.89e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.89e-12
Glyma.19G027200 hypothetical protein AT5G15400:AT5G15400:U-box domain-containing protein 1Chr19:3392784–3401129 (-)3.162e-12
Glyma.19G027900 hypothetical protein AT5G15450:CLPB3:casein lytic proteinase B3 1Chr19:3485283–3498153 (-)1.485e-11
Glyma.19G037400 hypothetical protein AT5G38820:AT5G38820:Transmembrane amino acid transporter family protein 1Chr19:5224298–5228610 (-)3.198e-13
Glyma.19G038000 hypothetical protein AT3G02350:GAUT9:galacturonosyltransferase 9 1Chr19:5321094–5324327 (+)3.198e-13
Glyma.19G038100 hypothetical protein NA 1Chr19:5350324–5355097 (+)4.47e-11
Glyma.19G038300 hypothetical protein NA 1Chr19:5381177–5383149 (+)3.198e-13
Glyma.19G038400 hypothetical protein AT3G02360:AT3G02360:6-phosphogluconate dehydrogenase family protein 1Chr19:5386122–5388865 (+)3.198e-13
Glyma.19G125300 hypothetical protein AT3G56880:AT3G56880:VQ motif-containing protein__AT2G41010:CAMBP25:calmodulin (CAM)-binding protein of 25 kDa 1Chr19:38346007–38347425 (-)1.529e-11
Glyma.19G125400 hypothetical protein AT3G12390:AT3G12390:Nascent polypeptide-associated complex (NAC), alpha subunit family protein 1Chr19:38371477–38374357 (-)1.529e-11
Glyma.19G125800 hypothetical protein AT2G40840:DPE2:disproportionating enzyme 2 1Chr19:38410642–38423531 (+)1.529e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)9.674e-16
Glyma.19G247800 hypothetical protein NA 1Chr19:49385792–49388122 (-)3.586e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)4.37e-12
Glyma.20G019700 hypothetical protein NA 1Chr20:2047020–2050862 (-)2.829e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.66e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)7.444e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)5.74e-11
Glyma.20G108600 hypothetical protein NA 1Chr20:35099991–35104464 (+)4.787e-13
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)2.206e-12
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)8.675e-11
Glyma.20G123100 hypothetical protein AT2G01110:APG2:Sec-independent periplasmic protein translocase 1Chr20:36592639–36595961 (+)3.56e-13
Glyma.20G123500 hypothetical protein NA 1Chr20:36610054–36614582 (-)2.229e-11