Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44755

Metabolite ID
P44755
Deionized mass
640.3493 Da
Average m/z
641.3501
Average RT
22.8321
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
150
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

150 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)3.286e-13
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 4Chr16:35831912–35835153 (+)7.246e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 3Chr03:2423540–2428634 (-)1.763e-18
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.983e-11
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.006e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)9.124e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)4.453e-12
Glyma.03G251100 hypothetical protein AT3G04490:AT3G04490:exportin-4 protein 2Chr03:44673965–44702804 (-)6.398e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.205e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.205e-11
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)3.008e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.037e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)7.251e-12
Glyma.16G072000 hypothetical protein AT1G52800:AT1G52800:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 2Chr16:7255773–7261809 (+)7.401e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.78e-14
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.131e-11
Glyma.16G139000 hypothetical protein NA 2Chr16:29623540–29631451 (+)3.677e-12
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)2.839e-12
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.477e-13
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)5.826e-11
Glyma.03G019600 hypothetical protein AT2G45640:SAP18:SIN3 associated polypeptide P18 1Chr03:2007617–2009871 (+)2.888e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.828e-11
Glyma.03G250400 hypothetical protein AT3G04470:AT3G04470:Ankyrin repeat family protein 1Chr03:44616824–44621636 (-)1.649e-11
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)2.769e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)4.339e-11
Glyma.04G190200 hypothetical protein AT3G48330:PIMT1:protein-l-isoaspartate methyltransferase 1 1Chr04:46086785–46089618 (-)2.74e-11
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)3.393e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.098e-15
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)6.296e-17
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)3.437e-16
Glyma.05G226400 hypothetical protein AT4G29140:ADS1:MATE efflux family protein 1Chr05:40480968–40482410 (-)8.231e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.264e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.489e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)3.611e-16
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)4.055e-13
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)1.042e-12
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)1.042e-12
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)1.042e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)2.452e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)2.452e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)3.654e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)3.012e-11
Glyma.06G276300 hypothetical protein NA 1Chr06:46741410–46744086 (-)2.09e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.075e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)1.646e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.075e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.075e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)1.646e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.983e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.983e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.846e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.895e-13
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)5.316e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)3.715e-12
Glyma.07G095400 hypothetical protein NA 1Chr07:8914725–8920132 (+)8.365e-12
Glyma.07G097000 hypothetical protein AT1G19670:CLH1:chlorophyllase 1 1Chr07:9118318–9120182 (-)1.626e-11
Glyma.07G100400 hypothetical protein AT3G18050:AT3G18050:GPI-anchored protein 1Chr07:9523110–9526319 (+)1.166e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.853e-12
Glyma.08G184300 hypothetical protein NA 1Chr08:14784345–14786953 (+)2.12e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)8.102e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)2.702e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)5.588e-12
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)3.516e-11
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)7.151e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)1.927e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)1.025e-11
Glyma.09G069400 hypothetical protein NA 1Chr09:7055066–7058933 (+)2.019e-11
Glyma.09G177400 hypothetical protein NA 1Chr09:40183616–40184826 (-)2.236e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)3.436e-12
Glyma.09G269100 hypothetical protein NA 1Chr09:48651429–48653656 (-)7.908e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)7.416e-13
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.192e-12
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)1.434e-12
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)5.081e-12
Glyma.11G095100 hypothetical protein NA 1Chr11:7212438–7214276 (-)4.796e-11
Glyma.11G105600 hypothetical protein NA 1Chr11:8021436–8024175 (+)1.774e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)9.64e-13
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)1.685e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)1.685e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)1.685e-11
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)3.126e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)3.864e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)3.864e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.624e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)2.92e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.081e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.081e-11
Glyma.12G228000 hypothetical protein AT1G53210:AT1G53210:sodium/calcium exchanger family protein / calcium-binding EF hand family protein 1Chr12:38789187–38797498 (+)8.08e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)3.598e-11
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)1.006e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.205e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.205e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)3.148e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)1.766e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)3.238e-17
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.037e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)7.251e-12
Glyma.15G047100 hypothetical protein AT1G71240:AT1G71240:chromosome-partitioning protein, putative (DUF639) 1Chr15:3736217–3746037 (+)2.419e-11
Glyma.15G047800 hypothetical protein AT1G33270:AT1G33270:Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein 1Chr15:3777567–3783739 (+)2.419e-11
Glyma.15G070100 hypothetical protein AT1G61140:EDA16:SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-like protein 1Chr15:5355553–5364428 (+)3.157e-15
Glyma.15G071600 hypothetical protein AT4G21660:AT4G21660:proline-rich spliceosome-associated (PSP) family protein 1Chr15:5481672–5488866 (-)3.157e-15
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)5.731e-16
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.479e-15
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)5.731e-16
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)5.731e-16
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.866e-16
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)4.629e-20
Glyma.16G050500 AFB3B auxin signaling F-box 3 protein AT3G26810:AFB2:auxin signaling F-box 2 1Chr16:4853237–4856710 (+)5.169e-13
Glyma.16G051100 hypothetical protein NA 1Chr16:4896279–4898219 (-)6.263e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.09e-12
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)6.404e-11
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)5.729e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.286e-13
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)3.304e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)9.124e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)9.124e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)9.124e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)9.124e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)5.002e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)4.358e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)2.189e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.567e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)1.697e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)8.951e-12
Glyma.16G137600 hypothetical protein NA 1Chr16:29468438–29472890 (-)4.633e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)6.235e-14
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)2.134e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)2.503e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)2.503e-11
Glyma.16G161500 hypothetical protein NA 1Chr16:32076715–32092322 (-)2.559e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.417e-14
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)4.699e-12
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)4.699e-12
Glyma.16G196900 hypothetical protein NA 1Chr16:35841279–35846894 (-)4.146e-13
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)4.316e-12
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)1.375e-12
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)2.825e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.122e-12
Glyma.18G179200 hypothetical protein NA 1Chr18:43222934–43228759 (-)9.249e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)5.966e-11
Glyma.18G231500 hypothetical protein NA 1Chr18:52019138–52019828 (-)1.298e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)1.697e-12
Glyma.18G298600 hypothetical protein AT1G44960:AT1G44960:SNARE associated Golgi protein family 1Chr18:57614292–57617223 (+)3.314e-11
Glyma.18G298800 hypothetical protein NA 1Chr18:57633577–57639546 (+)5.258e-11
Glyma.19G009400 hypothetical protein AT5G40270:AT5G40270:HD domain-containing metal-dependent phosphohydrolase family protein 1Chr19:885045–893253 (+)1.35e-14
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.922e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.922e-12
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)2.324e-13
Glyma.20G108700 hypothetical protein AT1G09290:AT1G09290:uncharacterized protein 1Chr20:35109869–35115132 (-)8.151e-11
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)2.83e-11