Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P44493

Metabolite ID
P44493
Deionized mass
1766.9806 Da
Average m/z
884.4963
Average RT
22.6763
Adduct
[M+2H]2+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.15G192700 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 3Chr15:21029024–21058079 (-)1.427e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)2.962e-11
Glyma.03G135200 hypothetical protein NA 2Chr03:35070964–35078620 (+)2.428e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)8.267e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.224e-12
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)5.992e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)9.904e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)4.799e-15
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.373e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)5.349e-11
Glyma.08G210200 hypothetical protein NA 1Chr08:17010526–17012557 (+)6.976e-12
Glyma.08G210300 hypothetical protein NA 1Chr08:17011623–17012548 (-)6.976e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.591e-14
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)2.463e-12
Glyma.11G019200 hypothetical protein AT4G23730:AT4G23730:Galactose mutarotase-like superfamily protein 1Chr11:1353056–1355103 (-)7.514e-11
Glyma.11G077300 hypothetical protein AT2G17890:CPK16:calcium-dependent protein kinase 16__AT5G66210:CPK28:calcium-dependent protein kinase 28__AT4G36070:CPK… 1Chr11:5795953–5801540 (+)1.577e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.274e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.224e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.274e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.545e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.387e-15
Glyma.15G191500 hypothetical protein AT1G30800:AT1G30800:Fasciclin-like arabinogalactan family protein 1Chr15:20695259–20696664 (+)1.033e-12
Glyma.15G191700 hypothetical protein NA 1Chr15:20773059–20773940 (-)4.28e-11
Glyma.15G192400 hypothetical protein AT5G49150:GEX2:gamete expressed 2 1Chr15:20964449–20974340 (+)1.427e-11
Glyma.15G192900 hypothetical protein NA 1Chr15:21108370–21110353 (+)1.427e-11
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)1.624e-16
Glyma.15G215400 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr15:35264851–35271438 (+)4.611e-12
Glyma.15G215600 hypothetical protein NA 1Chr15:35287701–35293607 (-)4.611e-12
Glyma.15G216700 hypothetical protein NA 1Chr15:35649229–35652466 (-)1.82e-11
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)1.82e-11
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)1.82e-11
Glyma.15G232600 hypothetical protein NA 1Chr15:43719004–43723574 (+)6.795e-11
Glyma.15G232700 hypothetical protein NA 1Chr15:43725286–43732237 (+)3.254e-11
Glyma.16G014200 hypothetical protein AT5G12370:SEC10:exocyst complex component sec10 1Chr16:1243163–1253803 (-)4.932e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)5.992e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)2.962e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)2.962e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)2.962e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)2.962e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.155e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)8.965e-11
Glyma.19G254400 hypothetical protein NA 1Chr19:49924525–49925146 (+)3.302e-11