Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P43582

Metabolite ID
P43582
Deionized mass
321.2603 Da
Average m/z
322.2673
Average RT
22.1359
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
58
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

58 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)4.346e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.202e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)4.909e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)4.909e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)4.909e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)6.688e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.202e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)7.504e-14
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.881e-12
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)4.485e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)6.629e-11
Glyma.02G287700 hypothetical protein AT3G58780:SHP1:K-box region and MADS-box transcription factor family protein__AT2G42830:SHP2:K-box region and MADS-box … 1Chr02:46797935–46805223 (-)9.001e-12
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)3.332e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.397e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)1.665e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)1.665e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.683e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.494e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.494e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.494e-13
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)3.848e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.426e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)6.232e-13
Glyma.09G018700 hypothetical protein NA 1Chr09:1470411–1472672 (-)2.552e-12
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)3.7e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.151e-11
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)4.909e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)4.909e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)4.909e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)4.909e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)4.909e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)4.884e-14
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)4.884e-14
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)4.884e-14
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)4.884e-14
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.543e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.404e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.534e-13
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.534e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.497e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.497e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.044e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)6.772e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.235e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.235e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)2.915e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.853e-12
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)1.144e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)1.144e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)1.144e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.408e-12
Glyma.14G066800 hypothetical protein NA 1Chr14:5511222–5513114 (+)4.024e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)4.141e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.659e-14
Glyma.16G207900 hypothetical protein AT5G08450:AT5G08450:zinc finger CCCH domain protein 1Chr16:36754888–36763450 (+)2.464e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)1.177e-11
Glyma.17G135100 hypothetical protein AT1G62840:AT1G62840:ankyrin repeat/KH domain protein (DUF1442) 1Chr17:10870710–10872285 (+)1.726e-13
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)6.675e-12