Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P42613

Metabolite ID
P42613
Deionized mass
293.2041 Da
Average m/z
294.2118
Average RT
21.5320
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.02G121500 hypothetical protein NA 3Chr02:12065640–12082937 (+)6.696e-11
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 2Chr07:6464646–6470484 (+)4.88e-13
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)1.007e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)7.932e-12
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)4.962e-11
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.391e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.227e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)5.46e-12
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)3.922e-11
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)3.922e-11
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)3.922e-11
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)3.922e-11
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)3.922e-11
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)3.922e-11
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)3.922e-11
Glyma.02G109400 hypothetical protein NA 1Chr02:10495046–10497626 (-)2.083e-12
Glyma.02G109900 hypothetical protein AT2G03150:emb1579:ATP/GTP-binding protein family 1Chr02:10547851–10557930 (+)2.083e-12
Glyma.02G113000 hypothetical protein AT1G69370:CM3:chorismate mutase 3 1Chr02:10939096–10941983 (-)6.887e-12
Glyma.02G133800 hypothetical protein AT1G49660:CXE5:carboxyesterase 5 1Chr02:13850366–13851962 (-)6.079e-14
Glyma.07G068000 hypothetical protein AT3G61460:BRH1: 1Chr07:6128862–6129740 (+)3.328e-12
Glyma.07G068200 hypothetical protein AT4G00310:EDA8:Putative membrane lipoprotein 1Chr07:6146155–6148036 (-)4.465e-12
Glyma.07G068600 hypothetical protein NA 1Chr07:6192764–6197166 (+)1.073e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)8.867e-13
Glyma.07G075400 hypothetical protein NA 1Chr07:6849233–6853058 (+)4.597e-11
Glyma.08G147300 hypothetical protein NA 1Chr08:11238871–11242682 (+)5.31e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.054e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.066e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)7.142e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)6.257e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)1.771e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)1.771e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)1.771e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)1.771e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.692e-12
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)1.692e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)1.692e-12
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)8.426e-12
Glyma.13G163400 hypothetical protein AT5G20350:TIP1:Ankyrin repeat family protein with DHHC zinc finger domain-containing protein 1Chr13:27861309–27869162 (+)1.054e-11
Glyma.16G003000 hypothetical protein AT1G58025:AT1G58025:DNA-binding bromodomain-containing protein 1Chr16:164584–168767 (+)4.29e-11
Glyma.16G003200 hypothetical protein NA 1Chr16:172940–178668 (-)4.29e-11
Glyma.16G003600 hypothetical protein AT5G49945:AT5G49945: 1Chr16:198072–202486 (-)3.503e-11
Glyma.20G034000 hypothetical protein AT2G03060:AGL30:AGAMOUS-like 30 1Chr20:4655939–4664465 (-)1.434e-12