Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35845

Metabolite ID
P35845
Deionized mass
603.4164 Da
Average m/z
604.4224
Average RT
17.9328
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
112
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

112 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)1.489e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.851e-12
Glyma.16G196900 hypothetical protein NA 3Chr16:35841279–35846894 (-)9.441e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)8.014e-13
Glyma.09G246700 hypothetical protein AT1G22840:CYTC-1:CYTOCHROME C-1 2Chr09:46835469–46838091 (-)1.711e-11
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)2.533e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)2.533e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)2.533e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)7.066e-13
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)3.366e-13
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 2Chr12:36267599–36271584 (+)2.221e-16
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)1.103e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)8.255e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)3.228e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)1.259e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)1.259e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.385e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 2Chr16:35831912–35835153 (+)1.029e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)1.489e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.538e-13
Glyma.01G034700 hypothetical protein NA 1Chr01:3599923–3602578 (-)1.33e-11
Glyma.02G091800 hypothetical protein NA 1Chr02:8129908–8133455 (+)9.748e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)8.655e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)1.705e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.873e-12
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)8.509e-14
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)5.262e-11
Glyma.04G044800 LBD16 LBD domain-containing transcription factor NA 1Chr04:3582233–3583098 (-)5.076e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)6.439e-11
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)1.187e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)1.187e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)1.187e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)5.874e-12
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)5.282e-14
Glyma.05G126400 hypothetical protein NA 1Chr05:31961493–31968339 (+)1.676e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)6.609e-13
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.7e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.7e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.258e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)3.529e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)3.529e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)3.529e-13
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.064e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)2.222e-12
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)5.766e-13
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.851e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.851e-12
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)5.494e-12
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)6.477e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.099e-14
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)6.102e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)5.428e-12
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)1.692e-15
Glyma.09G187600 hypothetical protein AT5G19460:NUDT20:nudix hydrolase homolog 20 1Chr09:41213588–41217191 (+)9.462e-12
Glyma.09G250000 hypothetical protein NA 1Chr09:47096937–47099390 (-)4.352e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)2.246e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)2.558e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)2.533e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)2.533e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)2.533e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)2.533e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)2.533e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)3.25e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.872e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)2.889e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)7.056e-14
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)7.056e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.221e-16
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.102e-14
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)3.228e-14
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.485e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)3.622e-12
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.259e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.259e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)1.428e-11
Glyma.13G156000 hypothetical protein AT2G07560:HA6:H[+]-ATPase 6__AT3G42640:HA8:H[+]-ATPase 8 1Chr13:27104338–27109785 (+)4.674e-11
Glyma.15G048800 hypothetical protein AT2G01080:AT2G01080:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr15:3852038–3855379 (+)8.154e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)1.489e-11
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)1.661e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)1.489e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)1.489e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.245e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.187e-11
Glyma.16G053400 hypothetical protein AT3G27000:ARP2:actin related protein 2 1Chr16:5187313–5196238 (-)1.961e-13
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.764e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)2.196e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)5.652e-11
Glyma.16G144200 hypothetical protein AT3G50380:AT3G50380:vacuolar protein sorting-associated protein, putative (DUF1162) 1Chr16:30434508–30475458 (-)1.617e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)4.241e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.866e-14
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)8.141e-17
Glyma.16G145400 hypothetical protein AT3G12090:TET6:tetraspanin6 1Chr16:30624348–30627475 (+)1.844e-11
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)1.866e-14
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)6.294e-13
Glyma.16G147400 hypothetical protein NA 1Chr16:30817535–30821568 (+)8.884e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)4.656e-12
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)3.195e-11
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)3.195e-11
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)1.683e-11
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.713e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)8.918e-11
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)8.918e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)9.572e-11
Glyma.18G230600 hypothetical protein AT3G61250:MYB17:myb domain protein 17 1Chr18:51934101–51937216 (-)4.64e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)1.529e-11
Glyma.18G242900 hypothetical protein NA 1Chr18:53113341–53119592 (-)8.135e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)4.531e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)4.531e-12
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.961e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)1.268e-11
Glyma.20G219100 hypothetical protein AT3G02830:ZFN1:zinc finger protein 1 1Chr20:45490419–45496014 (+)8.142e-11
Glyma.20G223300 hypothetical protein AT1G09770:CDC5:cell division cycle 5 1Chr20:45791239–45803369 (-)1.774e-11