Overview Annotation GWAS Evidence Associated genes

P35260

Metabolite ID
P35260
Deionized mass
491.2396 Da
Average m/z
492.2430
Average RT
17.7260
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
15
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

15 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)6.397e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.025e-13
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)3.895e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)3.895e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)3.894e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)3.894e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)1.621e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.562e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)4.101e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)4.101e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.795e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.795e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)7.46e-11
Glyma.20G019500 hypothetical protein AT1G21065:AT1G21065:secondary thiamine-phosphate synthase enzyme 1Chr20:2039210–2040459 (+)7.724e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)3.32e-14