Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P35079

Metabolite ID
P35079
Deionized mass
230.1274 Da
Average m/z
231.1357
Average RT
17.6367
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
85
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

85 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 4Chr06:49451501–49461369 (-)1.846e-16
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)5.596e-14
Glyma.20G122600 hypothetical protein AT2G01130:AT2G01130:DEA(D/H)-box RNA helicase family protein 3Chr20:36527607–36546140 (-)2.365e-13
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.945e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.078e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)8.173e-16
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)2.111e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)2.551e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)4.605e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)5.596e-14
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.127e-13
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.414e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)7.481e-11
Glyma.02G253300 hypothetical protein NA 1Chr02:44063023–44065910 (-)5.23e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.694e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.853e-14
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)7.643e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)9.463e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)3.063e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)3.063e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)3.063e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)1.515e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)1.515e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.846e-16
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.846e-16
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)3.553e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.945e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.945e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.945e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.945e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.245e-15
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)8.429e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)2.069e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.9e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.645e-12
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)6.42e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)8.814e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 1Chr10:2485817–2497071 (-)8.813e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.417e-11
Glyma.11G090300 hypothetical protein AT4G19190:AT4G19190:zinc knuckle (CCHC-type) family protein 1Chr11:6849007–6855564 (+)2.111e-11
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)2.944e-13
Glyma.11G182700 hypothetical protein AT1G32250:AT1G32250:Calcium-binding EF-hand family protein 1Chr11:25028353–25031056 (-)1.502e-12
Glyma.11G182800 hypothetical protein AT2G27460:AT2G27460:sec23/sec24 transport family protein 1Chr11:25044939–25052549 (+)1.032e-11
Glyma.11G183800 hypothetical protein AT5G22450:AT5G22450:spectrin beta chain, brain 1Chr11:25162867–25173439 (-)3.418e-11
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:33261569–33264662 (+)3.492e-11
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)1.735e-13
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)1.395e-12
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)1.395e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.271e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.682e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.682e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)5.743e-12
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.111e-13
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)7.105e-11
Glyma.15G009700 hypothetical protein NA 1Chr15:751766–753795 (+)1.688e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.336e-15
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.807e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)1.289e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)5.188e-17
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)1.021e-12
Glyma.16G025300 hypothetical protein NA 1Chr16:2438122–2440528 (-)9.546e-11
Glyma.16G025400 hypothetical protein AT2G46430:CNGC3:cyclic nucleotide gated channel 3 1Chr16:2443212–2450834 (-)9.546e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)5.333e-11
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)1.904e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.008e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)4.386e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.246e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.665e-12
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)2.423e-11
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)2.423e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.205e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.205e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)4.068e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)2.286e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)4.129e-12
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)4.605e-12
Glyma.18G201700 hypothetical protein NA 1Chr18:48175554–48180264 (+)3.04e-12
Glyma.18G204200 hypothetical protein NA 1Chr18:48697660–48700908 (+)6.541e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)6.008e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)6.008e-11
Glyma.19G027200 hypothetical protein AT5G15400:AT5G15400:U-box domain-containing protein 1Chr19:3392784–3401129 (-)2.883e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)7.169e-12
Glyma.19G150000 hypothetical protein AT3G58060:AT3G58060:Cation efflux family protein 1Chr19:41018746–41025024 (+)3.105e-12
Glyma.20G122300 hypothetical protein NA 1Chr20:36506583–36511326 (-)2.365e-13
Glyma.20G123100 hypothetical protein AT2G01110:APG2:Sec-independent periplasmic protein translocase 1Chr20:36592639–36595961 (+)7.232e-13