Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P34023

Metabolite ID
P34023
Deionized mass
472.1916 Da
Average m/z
473.1976
Average RT
17.2539
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
48
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

48 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.11G166200 hypothetical protein NA 5Chr11:15951003–15963149 (-)8.527e-13
Glyma.11G165900 hypothetical protein AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein 3Chr11:15890687–15912099 (-)1.228e-11
Glyma.11G167800 hypothetical protein NA 3Chr11:16649420–16666371 (+)8.527e-13
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 3Chr19:1134716–1143232 (+)2.207e-11
Glyma.11G166100 hypothetical protein AT2G30110:UBA1:ubiquitin-activating enzyme 1 2Chr11:15941545–15948932 (+)8.529e-13
Glyma.11G170100 hypothetical protein NA 2Chr11:18127748–18139401 (-)1.228e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)6.967e-16
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.987e-14
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.183e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)4.208e-11
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)3.415e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)5.715e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)2.679e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)4.442e-12
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.157e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.157e-11
Glyma.08G132700 hypothetical protein NA 1Chr08:10163807–10167725 (-)5.911e-14
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.926e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)2.469e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.4e-12
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.4e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.4e-12
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.4e-12
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)2.75e-11
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)2.75e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.124e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)9.716e-11
Glyma.11G167100 hypothetical protein NA 1Chr11:16310396–16317417 (+)1.228e-11
Glyma.11G167200 hypothetical protein AT5G58550:EOL2:ETO1-like 2 1Chr11:16317737–16322178 (-)8.527e-13
Glyma.11G167400 hypothetical protein NA 1Chr11:16491689–16494364 (-)1.228e-11
Glyma.11G169000 hypothetical protein AT5G42140:AT5G42140:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 1Chr11:17630347–17635221 (-)8.529e-13
Glyma.11G169100 hypothetical protein NA 1Chr11:17689415–17689861 (+)8.529e-13
Glyma.11G169300 hypothetical protein AT2G30080:ZIP6:ZIP metal ion transporter family 1Chr11:17933930–17936688 (+)8.527e-13
Glyma.11G169500 hypothetical protein NA 1Chr11:18001828–18002310 (+)1.228e-11
Glyma.11G169700 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 1Chr11:18034188–18046104 (-)1.228e-11
Glyma.11G169900 hypothetical protein AT2G30070:KT1:potassium transporter 1 1Chr11:18079371–18084598 (-)8.527e-13
Glyma.11G170300 hypothetical protein AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 1Chr11:18242402–18247271 (+)1.228e-11
Glyma.11G170700 hypothetical protein AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 1Chr11:18313678–18328202 (-)1.228e-11
Glyma.11G170800 hypothetical protein NA 1Chr11:18343004–18346283 (+)1.228e-11
Glyma.11G170900 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 1Chr11:18345392–18359356 (-)1.228e-11
Glyma.11G171500 hypothetical protein NA 1Chr11:18629660–18631015 (+)2.001e-12
Glyma.11G171800 hypothetical protein NA 1Chr11:18663180–18666591 (-)2.001e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.86e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)7.056e-13
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)2.773e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)8.643e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)2.375e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)2.375e-11