Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P33309

Metabolite ID
P33309
Deionized mass
504.3240 Da
Average m/z
505.3323
Average RT
16.9903
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
43
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

43 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.03G021400 hypothetical protein AT2G45540:AT2G45540:WD-40 repeat family protein / beige-like protein 2Chr03:2202325–2234931 (+)3.314e-11
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)2.397e-11
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)6.333e-14
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)8.037e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)8.037e-12
Glyma.16G146700 hypothetical protein NA 2Chr16:30755899–30759360 (-)6.761e-15
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)5.21e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)5.21e-13
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)7.761e-13
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)8.859e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.415e-11
Glyma.06G078400 hypothetical protein AT4G31290:AT4G31290:ChaC-like family protein 1Chr06:6068728–6071360 (+)9.179e-11
Glyma.06G079400 hypothetical protein NA 1Chr06:6105463–6107101 (+)1.594e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)2.397e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)2.397e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)2.397e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)2.397e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.369e-11
Glyma.09G249500 hypothetical protein NA 1Chr09:47056885–47062577 (+)2.836e-11
Glyma.09G280300 hypothetical protein AT2G38480:AT2G38480:Uncharacterized protein family (UPF0497) 1Chr09:49547489–49550731 (-)1.422e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.688e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.688e-11
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)5.19e-12
Glyma.12G186300 hypothetical protein NA 1Chr12:34717587–34719271 (+)7.01e-11
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.26e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.638e-14
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)5.529e-12
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.209e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.209e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)1.171e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)1.171e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)8.037e-12
Glyma.14G093100 hypothetical protein NA 1Chr14:8654730–8655892 (-)3.253e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)9.166e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)7.982e-12
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)4.553e-12
Glyma.16G146300 hypothetical protein NA 1Chr16:30714315–30716624 (+)6.761e-15
Glyma.16G209300 hypothetical protein NA 1Chr16:36856833–36863994 (-)9.395e-11
Glyma.18G266200 hypothetical protein NA 1Chr18:55065716–55066843 (-)5.876e-11
Glyma.19G005200 hypothetical protein AT3G27640:AT3G27640:Transducin/WD40 repeat-like superfamily protein 1Chr19:472201–476152 (-)4.784e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)8.097e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)8.097e-12
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)7.169e-13