SNP and gene associations use P < 10⁻¹⁰. Change threshold · Counts cover features with indexed GWAS data; — means unavailable.

GeneAssociated metabolitesResearch resources

GENE DETAIL · Glycine max

Glyma.12G186300

Description hypothetical protein

Gene interval Chr12:34717587–34719271 (+), Wm82.a2.v1 · 1-based inclusive

Arabidopsis ortholog NA

Genome context

Explore gene–feature relationships using Overlap or Within ±5 kb. Scope definitions

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Associated metabolite features128Overlap
Maximum supporting SNP records2
Features with ≥2 supporting SNP records63

Supporting SNP records satisfy P < 10⁻¹⁰ and the selected positional scope. Counts cover the 30345 features with indexed GWAS data.

Additional descriptive statistic

Mean supporting SNP records per associated feature: 1.4922.

Research resources

Follow this gene identifier to compare annotations, examine protein function and find supporting literature.

These links search the displayed identifier. Check the organism, genome assembly and evidence in the destination record.

Compare gene models, expression and reported orthologs

SoyBase gene-name translator ↗SoyBase expression resources ↗Legume Information System ↗

Use expression and ortholog evidence to develop a testable hypothesis. The linked resources do not establish the function of this soybean gene in the measured samples.

Associated metabolites

Browse associated features and open their GWAS evidence or compound candidates.

128 matching features · page 1 of 13

Metabolite IDCandidate annotationDeionized mass (Da)Supporting SNP recordsMinimum P
P00268 trans-4-Carboxymethylenebut-2-en-4-olide 140.0099 23.178e-11
P03881 1-Phenyl-1-cyclohexene 158.1087 22.16e-13
P05287 6-Hydroxymethyl-7,8-dihydropterin diphosphate 355.0086 21.117e-11
P08013 HDMBOA-Glc 387.1117 21.766e-13
P08723 (2R,3R,5R)-2-(S-Pantetheinyl)-carbapenam-3-carboxylate 431.1720 24.611e-11
P09066 Prochlorperazine 373.1357 28.27e-12
P15088 Citronellate 170.1305 23.25e-12
P15142 No candidate annotation 521.2481 21.164e-11
P16784 N-{4-[(3,5-Difluorophenyl)sulfonyl]benzyl}imidazo[1,2-A]pyridine-6-Carboxamide 427.0800 26.896e-12
P17290 4,4-Difluoro-17beta-hydroxyandrost-5-en-3-one propionate 380.2170 21.505e-14