Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32826

Metabolite ID
P32826
Deionized mass
373.1797 Da
Average m/z
374.1870
Average RT
16.8144
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
140
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

140 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G011800 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 4Chr19:1134716–1143232 (+)7.607e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.193e-15
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)2.608e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)1.575e-11
Glyma.08G117700 hypothetical protein NA 2Chr08:9080318–9084658 (-)1.553e-11
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 2Chr08:9198213–9201688 (-)2.382e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)3.388e-11
Glyma.09G018700 hypothetical protein NA 2Chr09:1470411–1472672 (-)8.298e-12
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)2.098e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)2.098e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)1.393e-12
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)2.904e-11
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)7.39e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)8.905e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)9.114e-13
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)9.114e-13
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.085e-11
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)1.657e-11
Glyma.02G107400 hypothetical protein NA 1Chr02:10245905–10246706 (-)2.692e-11
Glyma.02G109200 hypothetical protein AT1G14180:AT1G14180:RING/U-box superfamily protein 1Chr02:10483830–10487258 (-)9.861e-11
Glyma.02G116900 hypothetical protein NA 1Chr02:11394318–11395331 (-)4.628e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)6.88e-13
Glyma.03G035400 hypothetical protein AT3G42630:AT3G42630:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:4282985–4285957 (-)4.778e-11
Glyma.03G035500 hypothetical protein NA 1Chr03:4289118–4294184 (+)4.858e-11
Glyma.03G041800 hypothetical protein NA 1Chr03:5307518–5311842 (+)9.832e-11
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)5.807e-11
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)5.197e-15
Glyma.04G084300 hypothetical protein AT2G25800:AT2G25800:elongation factor Ts (DUF810) 1Chr04:7153009–7158438 (+)5.297e-15
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)2.705e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)6.296e-12
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)1.066e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)6.068e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)6.068e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.726e-15
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)4.98e-15
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)4.98e-15
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)4.98e-15
Glyma.05G223100 hypothetical protein AT2G19680:AT2G19680:Mitochondrial ATP synthase subunit G protein 1Chr05:40259388–40262641 (+)8.827e-12
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)4.2e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)1.351e-14
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)1.485e-14
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.771e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)2.534e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.637e-16
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)6.14e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.248e-17
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.248e-17
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)9.016e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)5.282e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.334e-15
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)1.492e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)9.666e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)9.666e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)9.667e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)9.666e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)9.666e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)9.666e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)9.666e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)9.666e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)9.666e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)9.667e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)6.313e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)6.313e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)6.313e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)1.182e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.796e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)1.182e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)1.182e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.796e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)6.252e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)5.52e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.697e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)4.98e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)5.536e-11
Glyma.07G017600 hypothetical protein NA 1Chr07:1415837–1422680 (+)7.431e-12
Glyma.07G071000 hypothetical protein AT4G00480:ATMYC1:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr07:6464646–6470484 (+)9.846e-11
Glyma.07G075000 hypothetical protein AT5G60990:AT5G60990:DEA(D/H)-box RNA helicase family protein 1Chr07:6821674–6829551 (-)2.627e-12
Glyma.07G075300 hypothetical protein NA 1Chr07:6843882–6845602 (-)2.627e-12
Glyma.08G112600 hypothetical protein NA 1Chr08:8660670–8663379 (-)4.974e-13
Glyma.08G112700 hypothetical protein NA 1Chr08:8661027–8661191 (+)4.974e-13
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 1Chr08:9065033–9071774 (-)3.424e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.424e-11
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)7.322e-12
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)3.388e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)3.388e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)3.388e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)3.388e-11
Glyma.08G338900 hypothetical protein NA 1Chr08:45536950–45543029 (-)3.575e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)1.191e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.428e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.205e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)4.249e-14
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)2.748e-12
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)1.929e-13
Glyma.09G253800 hypothetical protein NA 1Chr09:47356240–47357763 (-)8.19e-11
Glyma.09G253900 hypothetical protein NA 1Chr09:47359742–47364806 (-)8.19e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)1.21e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.186e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)1.751e-11
Glyma.11G162500 hypothetical protein AT2G40435:AT2G40435:transcription factor SCREAM-like protein 1Chr11:15087390–15090683 (-)6.991e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.435e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)1.289e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)1.289e-12
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)6.788e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)6.788e-13
Glyma.12G183400 hypothetical protein NA 1Chr12:34427496–34440319 (-)4.408e-13
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)2.632e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)8.091e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 1Chr12:36406747–36413696 (+)9.632e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)7.363e-12
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)7.364e-12
Glyma.13G133800 hypothetical protein AT3G53520:UXS1:UDP-glucuronic acid decarboxylase 1 1Chr13:24601574–24606756 (-)2.094e-11
Glyma.13G133900 hypothetical protein NA 1Chr13:24613843–24616128 (+)2.094e-11
Glyma.13G134000 hypothetical protein NA 1Chr13:24618272–24619048 (-)2.094e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.193e-15
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)6.876e-15
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)7.303e-12
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)7.303e-12
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.098e-12
Glyma.14G068100 hypothetical protein AT3G12550:FDM3:XH/XS domain-containing protein 1Chr14:5701618–5711043 (-)5.432e-11
Glyma.14G068500 hypothetical protein NA 1Chr14:5741909–5745574 (-)5.374e-13
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.954e-12
Glyma.14G075900 hypothetical protein NA 1Chr14:6362111–6364010 (-)7.293e-11
Glyma.14G077100 hypothetical protein AT5G42610:AT5G42610:calcium uniporter (DUF607) 1Chr14:6486139–6488935 (+)2.061e-11
Glyma.14G077200 hypothetical protein AT5G42620:AT5G42620:metalloendopeptidase / zinc ion binding protein 1Chr14:6498564–6506068 (+)2.061e-11
Glyma.14G077300 hypothetical protein AT1G75040:PR5:pathosis-related protein 5 1Chr14:6508609–6520744 (-)2.061e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)3.702e-12
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)4.787e-12
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)3.702e-12
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)3.702e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.674e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.511e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)9.688e-12
Glyma.16G121000 IQD20 AT3G51380:IQD20:IQ-domain 20 1Chr16:26909514–26910355 (+)2.091e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.282e-12
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.652e-11
Glyma.19G006900 hypothetical protein AT5G14700:AT5G14700:NAD(P)-binding Rossmann-fold superfamily protein 1Chr19:686556–692466 (-)5.204e-11
Glyma.19G011900 hypothetical protein AT3G28140:AT3G28140:RNA ligase/cyclic nucleotide phosphodiesterase family protein__AT5G40190:AT5G40190:RNA ligase/cycli… 1Chr19:1148510–1149495 (+)7.025e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)6.346e-14
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.842e-11