Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P32563

Metabolite ID
P32563
Deionized mass
310.2130 Da
Average m/z
621.4326
Average RT
16.7159
Adduct
[2M+H]+
Association scope
Overlapping genes only
Associated genes
69
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

69 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.341e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)3.863e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.531e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 3Chr20:34984922–34988496 (+)3.336e-13
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)1.34e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.575e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)5.335e-12
Glyma.18G196200 hypothetical protein AT3G09100:AT3G09100:mRNA capping enzyme family protein 2Chr18:47102746–47129707 (+)7.743e-12
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)3.863e-11
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)4.386e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)3.659e-11
Glyma.03G019700 hypothetical protein AT3G61130:GAUT1:galacturonosyltransferase 1 1Chr03:2010835–2018418 (+)4.849e-11
Glyma.03G135300 hypothetical protein NA 1Chr03:35092248–35097578 (+)1.492e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.411e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.033e-11
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.528e-11
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.528e-11
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.528e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)7.029e-11
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)7.029e-11
Glyma.06G126300 hypothetical protein NA 1Chr06:10331312–10341252 (-)6.661e-11
Glyma.06G126400 hypothetical protein AT5G53150:AT5G53150:DnaJ heat shock amino-terminal domain protein 1Chr06:10356650–10362151 (-)1.419e-11
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)1.223e-11
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)7.502e-11
Glyma.06G317100 hypothetical protein AT5G61520:AT5G61520:Major facilitator superfamily protein 1Chr06:50586679–50589765 (+)1.159e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)7.296e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)7.537e-13
Glyma.11G241300 hypothetical protein AT4G39990:RABA4B:RAB GTPase homolog A4B 1Chr11:33552339–33555298 (+)1.316e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.065e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.575e-12
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.394e-11
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)1.339e-11
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.225e-16
Glyma.14G190100 hypothetical protein AT2G04280:AT2G04280:calcium ion-binding protein 1Chr14:45502008–45504459 (+)5.653e-11
Glyma.15G212800 hypothetical protein AT4G16340:SPK1:guanyl-nucleotide exchange factors;GTPase binding;GTP binding protein 1Chr15:33408140–33467420 (+)1.184e-11
Glyma.15G216700 hypothetical protein NA 1Chr15:35649229–35652466 (-)2.725e-15
Glyma.15G216900 hypothetical protein NA 1Chr15:35680524–35686654 (-)2.725e-15
Glyma.15G217100 hypothetical protein NA 1Chr15:35830853–35832075 (-)2.725e-15
Glyma.15G222600 hypothetical protein NA 1Chr15:40455677–40458003 (+)6.369e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)3.23e-11
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.341e-12
Glyma.16G112600 hypothetical protein NA 1Chr16:25015407–25020098 (-)3.256e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.531e-12
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.531e-12
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.531e-12
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.531e-12
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)7.007e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)7.843e-13
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)3.524e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.631e-12
Glyma.16G180000 hypothetical protein NA 1Chr16:34064572–34069421 (+)7.914e-13
Glyma.16G180100 hypothetical protein NA 1Chr16:34070806–34076053 (+)7.914e-13
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)1.251e-13
Glyma.16G196200 HSF-32 heat stress transcription factor 32 AT5G62020:HSFB2A:heat shock transcription factor B2A 1Chr16:35760178–35761852 (+)2.577e-11
Glyma.16G196800 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr16:35831912–35835153 (+)7.451e-11
Glyma.18G201900 hypothetical protein NA 1Chr18:48192545–48196624 (-)3.777e-12
Glyma.18G266400 hypothetical protein AT3G29390:RIK:RS2-interacting KH protein 1Chr18:55076548–55086297 (+)7.914e-12
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)9.689e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.871e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.87e-11
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr19:3511914–3519141 (+)6.882e-11
Glyma.20G106400 hypothetical protein AT5G23590:AT5G23590:DNAJ heat shock N-terminal domain-containing protein 1Chr20:34888699–34893605 (-)3.837e-12
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)3.106e-12
Glyma.20G107500 hypothetical protein AT2G16910:AMS:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr20:35011922–35015196 (-)6.256e-14
Glyma.20G107700 hypothetical protein AT2G16860:AT2G16860:GCIP-interacting family protein 1Chr20:35033414–35036538 (+)2.034e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)2.529e-12
Glyma.20G109000 hypothetical protein AT4G32640:AT4G32640:Sec23/Sec24 protein transport family protein__AT3G44340:CEF:uncharacterized protein 1Chr20:35134138–35152085 (-)9.687e-12
Glyma.20G110000 hypothetical protein AT3G54260:TBL36:TRICHOME BIREFRINGENCE-LIKE 36 1Chr20:35229423–35231861 (+)9.087e-11
Glyma.20G129900 hypothetical protein NA 1Chr20:37091399–37092697 (-)5.573e-12