Overview Annotation GWAS Evidence Associated genes

P30845

Metabolite ID
P30845
Deionized mass
552.2877 Da
Average m/z
553.2929
Average RT
16.1486
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
134
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

134 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)3.343e-12
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)4.647e-13
Glyma.08G226000 hypothetical protein AT3G13062:AT3G13062:Polyketide cyclase/dehydrase and lipid transport superfamily protein 3Chr08:18321377–18335864 (-)4.548e-11
Glyma.16G210200 hypothetical protein NA 3Chr16:36933402–36938940 (+)4.19e-12
Glyma.17G217900 hypothetical protein NA 3Chr17:36771760–36778616 (-)5.744e-14
Glyma.17G218600 hypothetical protein NA 3Chr17:36975400–36982812 (-)9.723e-13
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)1.741e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)5.968e-13
Glyma.08G122200 hypothetical protein NA 2Chr08:9416766–9429995 (-)1.745e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.745e-12
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 2Chr09:49863377–49871270 (+)7.501e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.497e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)8.002e-14
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)6.839e-14
Glyma.15G258300 hypothetical protein NA 2Chr15:48899412–48908116 (-)6.611e-11
Glyma.16G105100 hypothetical protein NA 2Chr16:21259552–21267517 (-)1.627e-11
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 2Chr16:24626024–24635513 (+)7.903e-11
Glyma.17G211500 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 2Chr17:34916813–34922875 (+)7.253e-12
Glyma.17G215800 Aberrant root formation protein 4 AT5G11030:ALF4:aberrant root formation protein 2Chr17:36328551–36338097 (+)6.273e-13
Glyma.17G216700 hypothetical protein AT4G31930:AT4G31930:Mitochondrial glycoprotein family protein 2Chr17:36510062–36519347 (+)1.984e-17
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)6.8e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)2.299e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)2.299e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.593e-13
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.432e-11
Glyma.03G242800 hypothetical protein AT4G08630:AT4G08630:fas-binding factor-like protein 1Chr03:44064511–44073939 (+)2.414e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)6.713e-11
Glyma.04G116900 hypothetical protein NA 1Chr04:13696275–13700803 (+)2.909e-11
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)3.669e-12
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)4.762e-12
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)4.762e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)6.918e-13
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.053e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)8.053e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)8.053e-13
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)4.787e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)2.161e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.29e-16
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)5e-16
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.28e-14
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.406e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.406e-12
Glyma.06G129800 hypothetical protein AT5G53030:AT5G53030:uncharacterized protein 1Chr06:10667029–10669377 (+)1.23e-11
Glyma.06G130100 hypothetical protein AT3G49290:ABIL2:ABL interactor-like protein 2 1Chr06:10695256–10699675 (+)1.23e-11
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)1.084e-11
Glyma.06G136200 hypothetical protein AT5G54170:AT5G54170:Polyketide cyclase/dehydrase and lipid transport superfamily protein 1Chr06:11160066–11162505 (-)4.818e-11
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)7.197e-11
Glyma.06G322000 hypothetical protein AT5G56170:LLG1:LORELEI-LIKE-GPI-ANCHORED PROTEIN 1 1Chr06:51042976–51045446 (-)4.355e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 1Chr07:1697119–1698666 (+)6.695e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)8.846e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)5.968e-13
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)9.577e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.745e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.745e-12
Glyma.08G122600 hypothetical protein NA 1Chr08:9445153–9450502 (+)5.311e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.745e-12
Glyma.08G139300 hypothetical protein AT2G22125:CSI1:binding protein 1Chr08:10653279–10664544 (-)4.914e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)4.136e-12
Glyma.08G215000 hypothetical protein NA 1Chr08:17420805–17426440 (-)3.952e-11
Glyma.08G226100 hypothetical protein AT3G13060:ECT5:evolutionarily conserved C-terminal region 5 1Chr08:18339384–18347070 (-)4.548e-11
Glyma.08G226400 hypothetical protein AT3G13050:NiaP:Major facilitator superfamily protein 1Chr08:18370226–18374060 (-)4.548e-11
Glyma.09G251800 hypothetical protein AT1G65380:CLV2:Leucine-rich repeat (LRR) family protein 1Chr09:47220796–47224266 (+)2.547e-12
Glyma.09G252000 hypothetical protein AT2G40730:CTEXP:kinase family with ARM repeat domain-containing protein 1Chr09:47233101–47242848 (+)3.702e-11
Glyma.09G252300 hypothetical protein AT5G16520:AT5G16520:uncharacterized protein 1Chr09:47254519–47261787 (-)3.702e-11
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)3.113e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)8.934e-13
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)8.301e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.319e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.319e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.319e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.319e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.674e-11
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)3.119e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)6.875e-12
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)6.875e-12
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)6.875e-12
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)2.293e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.807e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)8.425e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)8.425e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)6.61e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)2.879e-14
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)8.002e-14
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)6.839e-14
Glyma.14G201800 hypothetical protein AT5G58390:AT5G58390:Peroxidase superfamily protein 1Chr14:46728613–46733836 (+)9.668e-11
Glyma.15G009800 hypothetical protein NA 1Chr15:753771–758859 (-)1.636e-14
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.635e-13
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.119e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)1.83e-12
Glyma.16G105700 hypothetical protein NA 1Chr16:21404554–21412265 (-)2.384e-12
Glyma.16G105800 hypothetical protein NA 1Chr16:21409016–21412087 (-)2.384e-12
Glyma.16G106200 hypothetical protein NA 1Chr16:21463300–21469532 (+)2.384e-12
Glyma.16G106300 hypothetical protein AT5G23900:AT5G23900:Ribosomal protein L13e family protein 1Chr16:21495147–21497932 (+)4.517e-15
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)7.903e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)5.57e-11
Glyma.16G134900 hypothetical protein AT5G66470:AT5G66470:GTP-binding protein Era-like protein 1Chr16:29214758–29219443 (-)8.32e-12
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)1.137e-12
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)9.485e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.641e-13
Glyma.16G209900 hypothetical protein NA 1Chr16:36919141–36924601 (+)4.19e-12
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)1.152e-13
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)1.152e-13
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)1.075e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)1.075e-11
Glyma.17G199600 hypothetical protein AT2G45330:emb1067:RNA 2'-phosphotransferase, Tpt1 / KptA family 1Chr17:31731965–31738073 (+)6.623e-11
Glyma.17G200400 hypothetical protein NA 1Chr17:31864566–31869426 (-)6.623e-11
Glyma.17G201000 hypothetical protein AT3G49600:UBP26:ubiquitin-specific protease 26 1Chr17:31946807–31956876 (-)6.623e-11
Glyma.17G205900 hypothetical protein NA 1Chr17:33578345–33582235 (-)5.53e-11
Glyma.17G206000 hypothetical protein NA 1Chr17:33582328–33583013 (-)5.529e-11
Glyma.17G206100 hypothetical protein NA 1Chr17:33612472–33622199 (-)5.53e-11
Glyma.17G211600 hypothetical protein NA 1Chr17:34925097–34929797 (+)8.768e-12
Glyma.17G212100 hypothetical protein NA 1Chr17:35010757–35014587 (+)5.5e-11
Glyma.17G212300 hypothetical protein AT5G25310:AT5G25310:Exostosin family protein 1Chr17:35122156–35129564 (-)8.683e-13
Glyma.17G214600 hypothetical protein NA 1Chr17:36049053–36054871 (-)1.798e-12
Glyma.17G215200 hypothetical protein NA 1Chr17:36125880–36142936 (+)2.709e-11
Glyma.17G215300 hypothetical protein AT5G25265:AT5G25265:Hyp O-arabinosyltransferase-like protein 1Chr17:36142245–36146771 (-)1.529e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)1.24e-16
Glyma.17G215700 hypothetical protein AT5G11040:TRS120:TRS120 1Chr17:36319785–36329259 (-)6.273e-13
Glyma.17G218400 hypothetical protein NA 1Chr17:36900654–36906204 (+)1.029e-12
Glyma.17G218700 hypothetical protein NA 1Chr17:36986191–36991558 (-)9.723e-13
Glyma.17G218800 Peptidyl-prolyl cis-trans isomerase CYP57 AT4G33060:AT4G33060:Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein 1Chr17:37027171–37033720 (-)7.869e-11
Glyma.18G055400 hypothetical protein NA 1Chr18:4824726–4828902 (+)6.119e-11
Glyma.18G236700 hypothetical protein AT3G61490:AT3G61490:Pectin lyase-like superfamily protein 1Chr18:52558809–52562720 (+)3.131e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.911e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.911e-12
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)3.343e-12
Glyma.20G105000 F-box/LRR-repeat protein 10 AT2G17020:AT2G17020:F-box/RNI-like superfamily protein 1Chr20:34726756–34729686 (+)9.054e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)5.418e-13
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)2.345e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)8.998e-14
Glyma.20G109600 hypothetical protein AT3G14290:PAE2:20S proteasome alpha subunit E2__AT1G53850:PAE1:20S proteasome alpha subunit E1 1Chr20:35200934–35205885 (-)1.947e-11
Glyma.20G217700 hypothetical protein AT1G32810:AT1G32810:RING/FYVE/PHD zinc finger superfamily protein 1Chr20:45347424–45357977 (-)7.02e-11
Glyma.20G217800 hypothetical protein AT1G32850:UBP11:ubiquitin-specific protease 11__AT4G10590:UBP10:ubiquitin-specific protease 10 1Chr20:45369972–45380130 (+)7.02e-11
Glyma.20G218100 hypothetical protein AT1G32900:GBSS1:UDP-Glycosyltransferase superfamily protein 1Chr20:45387265–45391879 (-)7.02e-11