Overview Annotation GWAS Evidence Associated genes

P27877

Metabolite ID
P27877
Deionized mass
606.1949 Da
Average m/z
607.2039
Average RT
15.3319
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
144
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

Loading GWAS records…

Loading Manhattan plot…

This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

Loading Q–Q plot…
Loading GWAS summary…

Associated genes

144 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 5Chr16:30652378–30659548 (+)1.216e-15
Glyma.09G053800 hypothetical protein NA 3Chr09:4737413–4755632 (-)1.455e-12
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)1.355e-12
Glyma.15G019600 hypothetical protein AT5G48120:MET18:ARM repeat superfamily protein 3Chr15:1524472–1536978 (-)7.31e-14
Glyma.01G045600 hypothetical protein NA 2Chr01:5242432–5245038 (-)1.858e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)3.008e-15
Glyma.03G120100 hypothetical protein AT5G26120:ASD2:alpha-L-arabinofuranosidase 2 2Chr03:33174618–33180955 (+)1.589e-11
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)8.759e-13
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 2Chr12:36390283–36394245 (-)6.937e-19
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)2.293e-18
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)2.874e-16
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)7.924e-15
Glyma.15G019800 hypothetical protein AT1G51940:LYK3:protein kinase family protein / peptidoglycan-binding LysM domain-containing protein 2Chr15:1540655–1547540 (-)7.287e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.679e-15
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 2Chr16:30514629–30519598 (+)6.836e-12
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)9.861e-13
Glyma.01G045700 hypothetical protein AT1G69680:AT1G69680:ran guanine nucleotide release factor, putative (Mog1/PsbP/DUF1795-like photosystem II reaction cen… 1Chr01:5265956–5271379 (-)1.858e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.705e-13
Glyma.02G176800 hypothetical protein AT5G06839:TGA10:bZIP transcription factor family protein 1Chr02:29019977–29028838 (-)6.425e-11
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.261e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)3.877e-12
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)8.491e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.412e-11
Glyma.03G022900 hypothetical protein NA 1Chr03:2409690–2420328 (-)1.85e-11
Glyma.03G036800 TBP1 AT3G13445:TBP1:TATA binding protein 1 1Chr03:4472672–4477787 (-)6.688e-11
Glyma.03G149000 hypothetical protein AT2G48010:RKF3:receptor-like kinase in in flowers 3 1Chr03:36454104–36456822 (+)6.399e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)4.136e-13
Glyma.04G086600 hypothetical protein NA 1Chr04:7374806–7380808 (+)3.946e-11
Glyma.04G104400 hypothetical protein NA 1Chr04:9885009–9889282 (+)1.516e-12
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.436e-12
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)4.919e-12
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)9.103e-12
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.138e-12
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)4.847e-13
Glyma.06G019800 hypothetical protein NA 1Chr06:1494230–1501925 (+)4.72e-11
Glyma.06G085900 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr06:6617102–6622706 (-)4.43e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)3.094e-16
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)3.094e-16
Glyma.06G126500 hypothetical protein AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold superfamily protein 1Chr06:10367536–10373426 (-)7.257e-15
Glyma.06G126900 hypothetical protein AT5G04520:AT5G04520:3-oxoacyl-acyl-carrier synthase-like protein (Protein of unknown function DUF455) 1Chr06:10403126–10408307 (-)2.454e-14
Glyma.06G130300 hypothetical protein AT5G53080:AT5G53080:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr06:10709045–10716245 (-)9.062e-11
Glyma.06G130900 hypothetical protein AT4G27800:TAP38:thylakoid-associated phosphatase 38 1Chr06:10753446–10757827 (+)8.963e-12
Glyma.06G260900 hypothetical protein NA 1Chr06:44662225–44665728 (-)2.136e-11
Glyma.06G275800 hypothetical protein AT2G30980:SKdZeta:SHAGGY-related protein kinase dZeta 1Chr06:46677753–46682900 (-)6.348e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)2.635e-11
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)4.338e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)2.635e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)2.635e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)4.338e-12
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)1.345e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.892e-12
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.019e-12
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.185e-13
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)9.48e-11
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.372e-11
Glyma.09G052900 hypothetical protein NA 1Chr09:4652312–4653046 (+)5.774e-11
Glyma.09G054100 hypothetical protein NA 1Chr09:4780506–4788669 (-)5.774e-11
Glyma.09G056300 hypothetical protein NA 1Chr09:5059486–5068979 (+)2.056e-11
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)2.983e-11
Glyma.09G058900 hypothetical protein NA 1Chr09:5397968–5404650 (-)3.629e-14
Glyma.09G060200 hypothetical protein AT5G57150:AT5G57150:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr09:5571201–5579976 (-)7.929e-13
Glyma.09G060300 hypothetical protein AT5G57140:PAP28:purple acid phosphatase 28 1Chr09:5609003–5612943 (+)2.55e-12
Glyma.09G060600 hypothetical protein AT3G28430:AT3G28430:CLEC16A-like protein 1Chr09:5661672–5675338 (-)2.744e-11
Glyma.09G066400 hypothetical protein AT4G29790:AT4G29790:serine/arginine repetitive matrix protein 1Chr09:6509441–6524102 (+)1.385e-11
Glyma.09G068800 hypothetical protein AT5G35560:AT5G35560:DENN (AEX-3) domain-containing protein 1Chr09:6979166–6993110 (-)9.13e-15
Glyma.09G075500 hypothetical protein NA 1Chr09:8234794–8241097 (+)6.282e-12
Glyma.09G075600 hypothetical protein AT1G34630:AT1G34630:uncharacterized protein 1Chr09:8255346–8260648 (-)6.282e-12
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 1Chr09:8708840–8718819 (-)6.282e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)3.086e-15
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.055e-14
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.205e-13
Glyma.09G210700 hypothetical protein AT1G31970:STRS1:DEA(D/H)-box RNA helicase family protein 1Chr09:43466944–43471858 (-)8.676e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)9.582e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)9.582e-11
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)2.286e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)9.582e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)9.582e-11
Glyma.10G080600 hypothetical protein NA 1Chr10:9501678–9504456 (+)1.911e-11
Glyma.10G080700 hypothetical protein NA 1Chr10:9510013–9512097 (+)1.911e-11
Glyma.10G080900 hypothetical protein NA 1Chr10:9552268–9552854 (+)1.911e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.491e-11
Glyma.10G082100 hypothetical protein AT3G05680:EMB2016:embryo defective 2016 1Chr10:9934486–9960586 (-)2.825e-13
Glyma.10G082200 hypothetical protein NA 1Chr10:9967027–9970045 (-)1.917e-11
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)2.572e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.65e-11
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)3.339e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)3.339e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)3.339e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)3.339e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)1.085e-12
Glyma.12G008300 hypothetical protein AT3G21640:TWD1:FKBP-type peptidyl-prolyl cis-trans isomerase family protein 1Chr12:613939–617457 (+)4.705e-11
Glyma.12G028800 hypothetical protein AT1G50300:TAF15:TBP-associated factor 15 1Chr12:2148313–2153234 (-)8.455e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)2.172e-11
Glyma.12G197600 hypothetical protein AT4G03210:XTH9:xyloglucan endotransglucosylase/hydrolase 9 1Chr12:35879106–35881779 (+)3.708e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)2.163e-13
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)2.163e-13
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)1.434e-11
Glyma.12G203300 hypothetical protein AT4G03430:EMB2770:pre-mRNA splicing factor-like protein 1Chr12:36371465–36377700 (-)7.33e-15
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)2.874e-16
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)3.882e-14
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)6.418e-11
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)1.355e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)3.187e-11
Glyma.13G183400 hypothetical protein NA 1Chr13:29666942–29670201 (+)7.157e-11
Glyma.13G185400 hypothetical protein NA 1Chr13:29936606–29937420 (+)5.46e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)2.053e-11
Glyma.15G019700 hypothetical protein AT3G21360:AT3G21360:2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein 1Chr15:1539104–1541259 (+)7.287e-13
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 1Chr15:1573643–1577917 (+)1.101e-13
Glyma.15G020800 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr15:1605458–1610034 (-)1.003e-12
Glyma.15G021000 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr15:1616486–1626531 (-)1.003e-12
Glyma.15G021700 hypothetical protein NA 1Chr15:1669375–1690410 (+)4.337e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.124e-14
Glyma.15G141100 hypothetical protein NA 1Chr15:11554310–11555089 (+)3.026e-11
Glyma.16G039800 hypothetical protein NA 1Chr16:3730538–3733668 (-)5.161e-13
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.722e-15
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)2.116e-12
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)3.924e-11
Glyma.16G063600 hypothetical protein NA 1Chr16:6255512–6260421 (+)4.051e-11
Glyma.16G113000 hypothetical protein NA 1Chr16:25112070–25116073 (+)1.203e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)1.606e-15
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.066e-17
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)2.008e-11
Glyma.16G142300 hypothetical protein AT4G36850:AT4G36850:PQ-loop repeat family protein / transmembrane family protein 1Chr16:30086178–30091466 (-)2.426e-12
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)1.314e-13
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.867e-12
Glyma.16G164300 hypothetical protein NA 1Chr16:32316376–32319476 (-)7.678e-12
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)9.861e-13
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)9.573e-13
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)9.861e-13
Glyma.18G111000 F6'H1 feruloyl CoA ortho-hydroxylase 1 NA 1Chr18:13141007–13143331 (-)2.848e-11
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)5.996e-12
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)5.516e-12
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)9.834e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)3.946e-11
Glyma.18G299700 hypothetical protein AT2G43180:AT2G43180:Phosphoenolpyruvate carboxylase family protein 1Chr18:57755837–57757150 (-)1.945e-11
Glyma.18G301600 hypothetical protein AT2G33490:AT2G33490:hydroxyproline-rich glycoprotein family protein 1Chr18:57939468–57945328 (+)2.464e-11
Glyma.18G301900 hypothetical protein AT5G13190:GILP:GSH-induced LITAF domain protein 1Chr18:57953323–57956369 (-)2.192e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.579e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.579e-13
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.976e-11
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)1.976e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.965e-12
Glyma.20G120200 hypothetical protein NA 1Chr20:36268998–36282456 (-)1.819e-11
Glyma.20G211500 hypothetical protein AT3G63410:APG1:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr20:44820994–44827443 (+)1.074e-11