Overview Annotation GWAS Evidence Associated genes

P27394

Metabolite ID
P27394
Deionized mass
516.1699 Da
Average m/z
517.1741
Average RT
15.1992
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
67
GWAS result file
Available

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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This Q–Q plot describes the indexed records. For downsampled files, it does not represent the distribution across all tested variants. Data coverage

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Associated genes

67 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 3Chr16:26324650–26336836 (+)4.823e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)4.823e-12
Glyma.16G121500 hypothetical protein NA 2Chr16:27007186–27010856 (+)1.439e-14
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 2Chr16:34364037–34367765 (-)3.527e-11
Glyma.18G100200 hypothetical protein NA 2Chr18:10512806–10522231 (+)7.331e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)9.791e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)4.861e-11
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)4.782e-11
Glyma.03G021700 hypothetical protein AT2G45490:AUR3:ataurora3 1Chr03:2248429–2251737 (+)1.825e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)4.179e-13
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)3.964e-15
Glyma.05G137500 hypothetical protein NA 1Chr05:33012282–33015297 (-)1.676e-13
Glyma.05G137600 hypothetical protein NA 1Chr05:33018107–33020120 (-)1.928e-13
Glyma.06G223100 hypothetical protein NA 1Chr06:29407485–29421245 (+)2.156e-12
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)8.88e-11
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)8.88e-11
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)3.693e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.308e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)2.269e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)2.269e-11
Glyma.09G075500 hypothetical protein NA 1Chr09:8234794–8241097 (+)6.09e-14
Glyma.09G075600 hypothetical protein AT1G34630:AT1G34630:uncharacterized protein 1Chr09:8255346–8260648 (-)6.09e-14
Glyma.09G078300 hypothetical protein AT4G29400:AT4G29400:oxidoreductase/transition metal ion-binding protein (DUF3531) 1Chr09:8708840–8718819 (-)6.09e-14
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)7.709e-18
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.69e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.545e-12
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)6.293e-12
Glyma.09G270200 hypothetical protein AT5G01020:AT5G01020:Protein kinase superfamily protein 1Chr09:48725417–48728520 (-)8.904e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)4.107e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)4.787e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)4.593e-13
Glyma.11G147500 hypothetical protein AT5G60550:GRIK2:geminivirus rep interacting kinase 2__AT3G45240:GRIK1:geminivirus rep interacting kinase 1 1Chr11:11379868–11385928 (-)3.51e-11
Glyma.11G171200 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 1Chr11:18475119–18484515 (+)5.809e-11
Glyma.11G171500 hypothetical protein NA 1Chr11:18629660–18631015 (+)5.809e-11
Glyma.11G171800 hypothetical protein NA 1Chr11:18663180–18666591 (-)5.809e-11
Glyma.11G172200 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 1Chr11:18702580–18708310 (+)5.809e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)3.761e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)3.761e-11
Glyma.12G186200 hypothetical protein AT3G44350:NAC061:NAC domain containing protein 61 1Chr12:34708678–34710549 (+)1.165e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.01e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.01e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)7.339e-11
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)7.338e-11
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)7.338e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)8.613e-11
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.125e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.58e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)4.823e-12
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)4.823e-12
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)3.117e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)2.166e-11
Glyma.16G121400 hypothetical protein NA 1Chr16:26989007–26992349 (+)2.748e-12
Glyma.16G138800 hypothetical protein NA 1Chr16:29609432–29615000 (+)6.02e-11
Glyma.16G138900 hypothetical protein NA 1Chr16:29620531–29621995 (+)2.268e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.149e-15
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)2.58e-14
Glyma.16G140600 hypothetical protein NA 1Chr16:29836830–29839178 (+)7.212e-11
Glyma.16G144100 hypothetical protein NA 1Chr16:30432951–30434052 (-)6.805e-11
Glyma.16G144700 hypothetical protein AT5G66960:AT5G66960:Prolyl oligopeptidase family protein 1Chr16:30514629–30519598 (+)1.257e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.572e-16
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)3.399e-12
Glyma.18G091600 hypothetical protein NA 1Chr18:9165090–9166656 (-)1.253e-11
Glyma.18G099600 hypothetical protein AT4G27040:VPS22:EAP30/Vps36 family protein 1Chr18:10453308–10458891 (-)3.947e-11
Glyma.18G099700 hypothetical protein AT5G54860:AT5G54860:Major facilitator superfamily protein 1Chr18:10459970–10464888 (-)4.706e-11
Glyma.18G099900 hypothetical protein AT1G47578:AT1G47578:Biotin/lipoate A/B protein ligase family__AT4G31050:AT4G31050:Biotin/lipoate A/B protein ligase fam… 1Chr18:10471443–10475076 (+)3.947e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.083e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.083e-13