Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26984

Metabolite ID
P26984
Deionized mass
259.0765 Da
Average m/z
260.0835
Average RT
15.0830
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
53
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

53 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)1.505e-12
Glyma.11G241200 hypothetical protein AT5G10320:AT5G10320:ATP synthase subunit B 2Chr11:33537120–33542455 (-)3.238e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.722e-11
Glyma.01G117000 hypothetical protein NA 1Chr01:40366281–40370122 (+)2.91e-11
Glyma.01G117200 hypothetical protein NA 1Chr01:40497525–40501709 (-)2.91e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)4.108e-16
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)1.364e-18
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.488e-14
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)6.7e-12
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)1.856e-11
Glyma.02G253300 hypothetical protein NA 1Chr02:44063023–44065910 (-)1.846e-12
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)1.505e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)1.505e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)8.133e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.939e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)3.483e-14
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.223e-11
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.223e-11
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.223e-11
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.223e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)4.314e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)1.451e-13
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)4.158e-13
Glyma.11G048600 hypothetical protein AT5G67470:FH6:formin homolog 6 1Chr11:3634128–3639401 (-)5.891e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)5.239e-12
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)2.682e-11
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)2.682e-11
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)2.682e-11
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)2.682e-11
Glyma.11G127100 hypothetical protein AT1G06040:STO:B-box zinc finger family protein 1Chr11:9656242–9659517 (+)2.939e-11
Glyma.11G127200 hypothetical protein AT3G59480:AT3G59480:pfkB-like carbohydrate kinase family protein 1Chr11:9660434–9665570 (-)2.939e-11
Glyma.11G127300 hypothetical protein AT2G28480:AT2G28480:RNA-binding CRS1 / YhbY (CRM) domain protein 1Chr11:9667918–9671917 (-)2.939e-11
Glyma.11G236800 hypothetical protein AT5G09360:LAC14:laccase 14 1Chr11:33157016–33161441 (+)1.282e-13
Glyma.11G237000 hypothetical protein AT5G10050:AT5G10050:NAD(P)-binding Rossmann-fold superfamily protein 1Chr11:33169449–33171449 (+)9.422e-13
Glyma.11G237100 hypothetical protein NA 1Chr11:33172417–33173178 (+)1.282e-13
Glyma.11G237700 hypothetical protein NA 1Chr11:33203513–33233708 (-)2.375e-14
Glyma.11G238100 hypothetical protein AT4G39820:AT4G39820:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr11:33261569–33264662 (+)8.161e-12
Glyma.11G241000 hypothetical protein AT4G39960:AT4G39960:Molecular chaperone Hsp40/DnaJ family protein 1Chr11:33526493–33531210 (+)1.923e-14
Glyma.11G241400 hypothetical protein AT4G40000:AT4G40000:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr11:33556332–33563163 (-)2.671e-13
Glyma.11G241900 hypothetical protein NA 1Chr11:33589346–33594428 (-)2.671e-13
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)4.634e-11
Glyma.15G035600 hypothetical protein AT3G46740:TOC75-III:translocon at the outer envelope membrane of chloroplasts 75-III 1Chr15:2830678–2835534 (+)9.935e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.698e-15
Glyma.16G019400 SHAT1-5 NAC domain-containing protein 43-like NA 1Chr16:1725643–1728272 (+)4.928e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)3.9e-17
Glyma.16G020500 hypothetical protein AT4G00870:AT4G00870:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr16:1877938–1879947 (-)3.147e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.245e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.245e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)3.052e-11
Glyma.18G266500 hypothetical protein NA 1Chr18:55088284–55091427 (-)4.19e-12
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)5.869e-14
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)5.871e-14
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)2.799e-11