Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26949

Metabolite ID
P26949
Deionized mass
1139.5106 Da
Average m/z
1140.5225
Average RT
15.0816
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
54
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

54 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)1.42e-12
Glyma.18G226300 hypothetical protein NA 4Chr18:51471540–51498344 (+)1.203e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)3.096e-11
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 2Chr08:8768854–8772973 (-)3.644e-12
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.02e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)5.328e-11
Glyma.01G153200 hypothetical protein AT1G31730:AT1G31730:Adaptin family protein 1Chr01:49031976–49040525 (+)6.57e-11
Glyma.01G153300 hypothetical protein AT5G45340:CYP707A3:cytochrome P450, family 707, subfamily A, polypeptide 3__AT4G19230:CYP707A1:cytochrome P450, family … 1Chr01:49049375–49052359 (-)4.21e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)1.717e-11
Glyma.03G124500 hypothetical protein NA 1Chr03:33758928–33762195 (+)1.266e-15
Glyma.03G145700 hypothetical protein AT3G58030:AT3G58030:RING/U-box superfamily protein 1Chr03:36109689–36112241 (+)7.812e-11
Glyma.03G147400 hypothetical protein NA 1Chr03:36293698–36295294 (+)1.962e-12
Glyma.04G063900 hypothetical protein NA 1Chr04:5310107–5313853 (+)4.654e-19
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)5.69e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.282e-11
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)9.51e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)1.147e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.262e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)1.752e-14
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)8.555e-13
Glyma.06G315100 hypothetical protein AT5G04930:ALA1:aminophospholipid ATPase 1 1Chr06:50401945–50408153 (+)2.145e-12
Glyma.08G109000 SUB1 NA 1Chr08:8364770–8373803 (-)4.332e-12
Glyma.08G109400 CHS1 AT5G13930:TT4:Chalcone and stilbene synthase family protein 1Chr08:8391364–8394840 (+)2.523e-11
Glyma.08G110000 hypothetical protein AT3G23840:AT3G23840:HXXXD-type acyl-transferase family protein 1Chr08:8438346–8442806 (-)4.332e-12
Glyma.08G110200 hypothetical protein NA 1Chr08:8471393–8473156 (+)1.364e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)7.273e-13
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)1.785e-13
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)5.693e-14
Glyma.08G116400 hypothetical protein NA 1Chr08:8947598–8949573 (-)2.759e-12
Glyma.08G116700 hypothetical protein NA 1Chr08:8997512–9003565 (+)2.139e-11
Glyma.08G116800 hypothetical protein AT1G29240:AT1G29240:transcription initiation factor TFIID subunit, putative (DUF688) 1Chr08:9006479–9010442 (-)5.866e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)1.315e-11
Glyma.13G161900 PAP25 purple acid phosphatase AT5G34850:PAP26:purple acid phosphatase 26 1Chr13:27748190–27752685 (-)8.709e-11
Glyma.15G121100 hypothetical protein NA 1Chr15:9567797–9570248 (+)8.347e-15
Glyma.15G121300 hypothetical protein AT5G47760:PGLP2:2-phosphoglycolate phosphatase 2 1Chr15:9584685–9590201 (-)2.13e-14
Glyma.15G121500 hypothetical protein AT1G03370:AT1G03370:C2 calcium/lipid-binding and GRAM domain containing protein 1Chr15:9602794–9615281 (+)8.347e-15
Glyma.15G121800 hypothetical protein NA 1Chr15:9643746–9648073 (+)8.347e-15
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)2.021e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)1.921e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)1.42e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)5.785e-12
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)3.096e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)3.096e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)3.096e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)3.096e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)8.572e-12
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)1.848e-12
Glyma.16G140000 hypothetical protein AT5G01820:SR1:serine/threonine protein kinase 1 1Chr16:29738375–29739010 (+)2.489e-11
Glyma.16G145100 hypothetical protein NA 1Chr16:30578388–30581421 (-)3.507e-12
Glyma.16G145200 hypothetical protein NA 1Chr16:30586018–30588859 (-)9.26e-12
Glyma.16G145600 hypothetical protein AT1G11310:MLO2:Seven transmembrane MLO family protein__AT2G39200:MLO12:Seven transmembrane MLO family protein__AT1G6156… 1Chr16:30652378–30659548 (+)3.507e-12
Glyma.16G147000 hypothetical protein NA 1Chr16:30773803–30777822 (-)1.519e-11
Glyma.20G108900 hypothetical protein AT4G24175:AT4G24175:kinesin-like protein 1Chr20:35119868–35122488 (+)2.924e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.23e-12