Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26911

Metabolite ID
P26911
Deionized mass
736.3391 Da
Average m/z
737.3480
Average RT
15.0804
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
141
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

141 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.20G105300 hypothetical protein AT4G38470:STY46:ACT-like protein tyrosine kinase family protein 6Chr20:34757381–34771672 (+)1.135e-11
Glyma.11G166200 hypothetical protein NA 5Chr11:15951003–15963149 (-)7.493e-16
Glyma.03G042300 hypothetical protein NA 3Chr03:5350737–5353536 (-)3.393e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)9.033e-11
Glyma.11G165900 hypothetical protein AT5G58510:AT5G58510:Rab3 GTPase-activating protein catalytic protein 3Chr11:15890687–15912099 (-)8.623e-16
Glyma.11G167800 hypothetical protein NA 3Chr11:16649420–16666371 (+)7.493e-16
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)2.9e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 2Chr03:2423540–2428634 (-)1.337e-15
Glyma.08G303400 hypothetical protein NA 2Chr08:42139097–42147365 (+)9.319e-12
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)6.012e-12
Glyma.10G081700 hypothetical protein NA 2Chr10:9752508–9758422 (+)5.386e-15
Glyma.11G166100 hypothetical protein AT2G30110:UBA1:ubiquitin-activating enzyme 1 2Chr11:15941545–15948932 (+)7.493e-16
Glyma.11G170100 hypothetical protein NA 2Chr11:18127748–18139401 (-)8.623e-16
Glyma.11G170900 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 2Chr11:18345392–18359356 (-)8.623e-16
Glyma.11G171500 hypothetical protein NA 2Chr11:18629660–18631015 (+)2.501e-12
Glyma.11G171800 hypothetical protein NA 2Chr11:18663180–18666591 (-)2.501e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.664e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)8.34e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)1.11e-12
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.907e-11
Glyma.01G037200 hypothetical protein NA 1Chr01:3946315–3948100 (-)9.503e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.449e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)7.032e-11
Glyma.02G086900 hypothetical protein AT3G24130:AT3G24130:Pectin lyase-like superfamily protein 1Chr02:7553127–7557516 (-)1.341e-12
Glyma.02G088200 hypothetical protein AT1G64680:AT1G64680:beta-carotene isomerase D27 1Chr02:7717452–7725490 (+)2.731e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.299e-11
Glyma.03G007100 hypothetical protein AT5G17780:AT5G17780:alpha/beta-Hydrolases superfamily protein__AT5G17720:AT5G17720:alpha/beta-Hydrolases superfamily pr… 1Chr03:647777–651152 (-)7.769e-11
Glyma.03G022100 hypothetical protein AT4G32430:AT4G32430:Pentatricopeptide repeat (PPR) superfamily protein 1Chr03:2301675–2307263 (+)1.293e-11
Glyma.03G041500 hypothetical protein NA 1Chr03:5249601–5251509 (-)1.129e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)1.076e-11
Glyma.05G123300 hypothetical protein NA 1Chr05:31696132–31700404 (+)3.059e-12
Glyma.05G124200 hypothetical protein AT4G20790:AT4G20790:Leucine-rich repeat protein kinase family protein 1Chr05:31776906–31778608 (-)1.686e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)7.422e-13
Glyma.05G127200 hypothetical protein AT1G29790:AT1G29790:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:32014213–32017922 (-)7.13e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)8.564e-13
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)8.564e-13
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)8.354e-14
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)2.661e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)2.661e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)2.661e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)5.762e-11
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)8.096e-17
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.471e-17
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)1.236e-15
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)1.236e-15
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)9.319e-11
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)9.319e-11
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)9.319e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)9.034e-11
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)9.034e-11
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)2.203e-11
Glyma.07G071800 hypothetical protein AT4G20960:PyrD:Cytidine/deoxycytidylate deaminase family protein 1Chr07:6523253–6526707 (+)2.971e-11
Glyma.07G087700 hypothetical protein AT3G24495:MSH7:MUTS homolog 7 1Chr07:8111751–8121053 (+)6.361e-11
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)1.92e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)1.302e-12
Glyma.08G202000 hypothetical protein AT1G52150:ATHB-15:Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein 1Chr08:16375907–16384294 (-)1.076e-15
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)2.195e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.07e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)2.532e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)1.472e-11
Glyma.09G268900 hypothetical protein NA 1Chr09:48638803–48644136 (+)1.462e-11
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)7.955e-11
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)2.683e-15
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)2.683e-15
Glyma.10G079700 hypothetical protein AT2G35980:YLS9:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein family 1Chr10:9218478–9219468 (-)3.97e-12
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)2.683e-15
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)2.683e-15
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)5.083e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)2.79e-13
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)5.083e-11
Glyma.10G172600 hypothetical protein AT5G41900:AT5G41900:alpha/beta-Hydrolases superfamily protein__AT1G64670:BDG1:alpha/beta-Hydrolases superfamily protein 1Chr10:40628401–40633140 (-)6.325e-11
Glyma.10G238200 hypothetical protein AT5G07250:RBL3:RHOMBOID-like protein 3 1Chr10:46680865–46684088 (+)1.466e-11
Glyma.11G048300 hypothetical protein AT4G37640:ACA2:calcium ATPase 2 1Chr11:3601241–3607177 (+)2.209e-11
Glyma.11G049700 hypothetical protein NA 1Chr11:3731308–3734534 (+)7.407e-15
Glyma.11G050300 hypothetical protein AT2G23093:AT2G23093:Major facilitator superfamily protein 1Chr11:3765453–3771565 (+)6.071e-15
Glyma.11G050500 hypothetical protein AT5G67370:CGLD27:DUF1230 family protein (DUF1230) 1Chr11:3778152–3782174 (+)6.071e-15
Glyma.11G050600 hypothetical protein NA 1Chr11:3779988–3786583 (-)6.071e-15
Glyma.11G051600 hypothetical protein NA 1Chr11:3857225–3859564 (-)6.071e-15
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)1.924e-11
Glyma.11G165300 hypothetical protein AT3G18220:LPP4:Phosphatidic acid phosphatase (PAP2) family protein 1Chr11:15738707–15742464 (+)9.901e-11
Glyma.11G165400 hypothetical protein NA 1Chr11:15755004–15756199 (+)9.901e-11
Glyma.11G165500 hypothetical protein NA 1Chr11:15756251–15760166 (+)9.901e-11
Glyma.11G167100 hypothetical protein NA 1Chr11:16310396–16317417 (+)8.623e-16
Glyma.11G167200 hypothetical protein AT5G58550:EOL2:ETO1-like 2 1Chr11:16317737–16322178 (-)7.493e-16
Glyma.11G167400 hypothetical protein NA 1Chr11:16491689–16494364 (-)8.623e-16
Glyma.11G169000 hypothetical protein AT5G42140:AT5G42140:Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein 1Chr11:17630347–17635221 (-)7.493e-16
Glyma.11G169100 hypothetical protein NA 1Chr11:17689415–17689861 (+)7.493e-16
Glyma.11G169300 hypothetical protein AT2G30080:ZIP6:ZIP metal ion transporter family 1Chr11:17933930–17936688 (+)7.493e-16
Glyma.11G169500 hypothetical protein NA 1Chr11:18001828–18002310 (+)8.623e-16
Glyma.11G169700 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 1Chr11:18034188–18046104 (-)8.623e-16
Glyma.11G169900 hypothetical protein AT2G30070:KT1:potassium transporter 1 1Chr11:18079371–18084598 (-)7.493e-16
Glyma.11G170300 hypothetical protein AT3G47340:ASN1:glutamine-dependent asparagine synthase 1 1Chr11:18242402–18247271 (+)8.623e-16
Glyma.11G170700 hypothetical protein AT5G23880:CPSF100:cleavage and polyadenylation specificity factor 100 1Chr11:18313678–18328202 (-)8.623e-16
Glyma.11G170800 hypothetical protein NA 1Chr11:18343004–18346283 (+)8.623e-16
Glyma.11G171200 hypothetical protein AT5G58610:AT5G58610:PHD finger transcription factor 1Chr11:18475119–18484515 (+)2.501e-12
Glyma.11G172200 hypothetical protein AT1G07110:F2KP:fructose-2,6-bisphosphatase 1Chr11:18702580–18708310 (+)2.501e-12
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)5.45e-13
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)2.785e-11
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)2.785e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)1.071e-11
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)1.071e-11
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)9.818e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)9.818e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)4.282e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.306e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)1.306e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)2.772e-11
Glyma.13G135700 hypothetical protein NA 1Chr13:24812720–24818735 (+)2.772e-11
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 1Chr13:24820151–24823999 (-)2.772e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)4.067e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)7.114e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.664e-13
Glyma.15G020300 hypothetical protein AT1G51950:IAA18:indole-3-acetic acid inducible 18__AT3G16500:PAP1:phytochrome-associated protein 1 1Chr15:1573643–1577917 (+)1.289e-11
Glyma.15G020800 hypothetical protein AT3G16480:MPPalpha:mitochondrial processing peptidase alpha subunit 1Chr15:1605458–1610034 (-)7.418e-11
Glyma.15G021000 hypothetical protein AT5G50340:AT5G50340:DNA repair protein RadA-like protein 1Chr15:1616486–1626531 (-)7.418e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)6.567e-14
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)6.742e-13
Glyma.16G057500 hypothetical protein NA 1Chr16:5631176–5634867 (-)2.617e-12
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)9.705e-15
Glyma.16G057700 hypothetical protein AT3G27180:AT3G27180:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr16:5656328–5663040 (-)1.054e-11
Glyma.16G058100 hypothetical protein AT5G14180:MPL1:Myzus persicae-induced lipase 1 1Chr16:5685464–5692098 (+)8.903e-13
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)4.968e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.114e-11
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)2.9e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)2.9e-11
Glyma.16G121500 hypothetical protein NA 1Chr16:27007186–27010856 (+)1.66e-11
Glyma.16G139000 hypothetical protein NA 1Chr16:29623540–29631451 (+)1.733e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)3.864e-11
Glyma.18G050100 hypothetical protein NA 1Chr18:4323734–4329696 (+)1.436e-11
Glyma.18G111800 hypothetical protein AT1G32910:AT1G32910:HXXXD-type acyl-transferase family protein 1Chr18:13278653–13284970 (+)2.524e-11
Glyma.18G112600 hypothetical protein NA 1Chr18:13398219–13405422 (+)5.772e-11
Glyma.18G251900 hypothetical protein AT3G60320:AT3G60320:bZIP domain class transcription factor (DUF630 and DUF632)__AT1G02110:AT1G02110:bZIP domain class t… 1Chr18:53855786–53862322 (-)5.807e-12
Glyma.18G299100 hypothetical protein AT5G13420:TRA2:Aldolase-type TIM barrel family protein 1Chr18:57674222–57678396 (+)7.779e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)9.195e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)9.195e-13
Glyma.19G129500 hypothetical protein AT2G41160:AT2G41160:Ubiquitin-associated (UBA) protein 1Chr19:38884116–38901744 (-)9.986e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)1.021e-11
Glyma.20G104900 hypothetical protein NA 1Chr20:34706863–34713989 (-)1.135e-11
Glyma.20G105100 hypothetical protein NA 1Chr20:34737596–34737811 (-)6.106e-14
Glyma.20G105500 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein__AT5G05320:AT5G05320:FAD/NAD(P)-binding oxidoreduc… 1Chr20:34813357–34815998 (-)8.756e-12
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)5.738e-11