Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P26825

Metabolite ID
P26825
Deionized mass
850.3598 Da
Average m/z
851.3632
Average RT
15.0757
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
132
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

132 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.019e-12
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)3.764e-12
Glyma.07G095400 hypothetical protein NA 3Chr07:8914725–8920132 (+)5.847e-11
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)1.609e-11
Glyma.16G209300 hypothetical protein NA 3Chr16:36856833–36863994 (-)1.359e-11
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)9.591e-11
Glyma.04G084800 hypothetical protein AT5G11630:NOXY2:uncharacterized protein 2Chr04:7187985–7192897 (+)5.126e-12
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)7.831e-12
Glyma.07G095800 hypothetical protein NA 2Chr07:8969502–8976133 (+)8.051e-11
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)1.007e-12
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.006e-13
Glyma.09G277300 hypothetical protein NA 2Chr09:49271634–49276648 (-)7.248e-11
Glyma.10G272800 hypothetical protein AT1G25350:OVA9:glutamine-tRNA ligase, putative / glutaminyl-tRNA synthetase, putative / GlnRS 2Chr10:49530856–49539222 (+)3.627e-11
Glyma.16G117400 hypothetical protein NA 2Chr16:26234552–26238233 (-)1.064e-13
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)9.633e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)5.603e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)1.059e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)1.642e-13
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)3.462e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.916e-12
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.916e-12
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.916e-12
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.916e-12
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.916e-12
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.916e-12
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.916e-12
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)9.591e-11
Glyma.02G193800 hypothetical protein AT5G06470:AT5G06470:Glutaredoxin family protein 1Chr02:36706657–36712744 (-)2.404e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)1.89e-11
Glyma.02G205400 hypothetical protein AT5G57880:MPS1:multipolar spindle 1 1Chr02:39040135–39043181 (-)4.602e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.185e-12
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)6.382e-11
Glyma.05G124700 hypothetical protein NA 1Chr05:31807311–31817648 (+)2.001e-11
Glyma.05G127300 hypothetical protein AT1G64520:RPN12a:regulatory particle non-ATPase 12A__AT5G42040:RPN12b:regulatory particle non-ATPase 12B 1Chr05:32021521–32025767 (-)3.276e-11
Glyma.05G127400 hypothetical protein AT1G29850:AT1G29850:double-stranded DNA-binding family protein 1Chr05:32030115–32033716 (+)3.276e-11
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)1.591e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.647e-13
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.647e-13
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.647e-13
Glyma.05G219200 hypothetical protein NA 1Chr05:39875137–39879113 (-)6.129e-13
Glyma.05G219800 TRE1 trehalase 1 AT4G24040:TRE1:trehalase 1 1Chr05:39920183–39925215 (+)2.39e-12
Glyma.05G220100 hypothetical protein AT1G33170:AT1G33170:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr05:39950499–39956022 (+)2.39e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)7.016e-18
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.691e-18
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)7.453e-18
Glyma.06G084800 hypothetical protein NA 1Chr06:6515571–6517480 (-)1.243e-11
Glyma.06G085000 hypothetical protein NA 1Chr06:6524339–6529016 (-)1.243e-11
Glyma.06G085100 hypothetical protein NA 1Chr06:6531956–6537295 (-)1.243e-11
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)9.384e-13
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)9.384e-13
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)3.927e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)3.927e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)3.927e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)3.927e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)3.927e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)3.927e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)3.927e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)3.927e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)3.927e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)3.927e-11
Glyma.06G261900 hypothetical protein NA 1Chr06:44875369–44879702 (-)1.193e-11
Glyma.06G303700 hypothetical protein AT1G05230:HDG2:homeodomain GLABROUS 2 1Chr06:49315918–49324382 (+)1.628e-11
Glyma.06G303800 hypothetical protein AT1G05220:AT1G05220:Transmembrane protein 97, Putative__AT2G32380:AT2G32380:Transmembrane protein 97, Putative 1Chr06:49328417–49330906 (-)1.628e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)3.764e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)3.764e-12
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)6.654e-17
Glyma.07G091400 COL21 CONSTANS-like zinc finger protein AT1G25440:BBX15:B-box type zinc finger protein with CCT domain-containing protein 1Chr07:8539101–8547001 (+)2.805e-11
Glyma.07G094200 hypothetical protein NA 1Chr07:8792240–8797837 (+)2.678e-11
Glyma.07G095500 hypothetical protein NA 1Chr07:8934807–8940626 (+)8.051e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)8.647e-11
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 1Chr08:9054060–9063297 (+)3.273e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)1.007e-12
Glyma.08G122000 hypothetical protein AT5G46400:PRP39-2:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr08:9397717–9410004 (+)3.339e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.006e-13
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.006e-13
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.006e-13
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.006e-13
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)2.516e-11
Glyma.08G182000 hypothetical protein NA 1Chr08:14601875–14604750 (+)3.506e-11
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)8.801e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.261e-11
Glyma.09G186700 hypothetical protein AT1G20050:HYD1:C-8,7 sterol isomerase 1Chr09:41147591–41150204 (+)3.846e-12
Glyma.09G187700 hypothetical protein AT3G24420:AT3G24420:alpha/beta-Hydrolases superfamily protein 1Chr09:41217358–41221592 (-)2.808e-12
Glyma.10G078700 hypothetical protein NA 1Chr10:8882318–8903950 (+)1.328e-13
Glyma.10G079100 hypothetical protein NA 1Chr10:8960669–8962364 (-)1.328e-13
Glyma.10G079800 hypothetical protein NA 1Chr10:9223520–9228511 (-)1.328e-13
Glyma.10G080000 hypothetical protein AT3G11660:NHL1:NDR1/HIN1-like 1__AT3G52470:AT3G52470:Late embryosis abundant (LEA) hydroxyproline-rich glycoprotein fam… 1Chr10:9258476–9260697 (-)1.328e-13
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)8.234e-12
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)3.875e-12
Glyma.10G265400 hypothetical protein AT2G01290:RPI2: 1Chr10:48921268–48922795 (+)5.33e-12
Glyma.11G110300 hypothetical protein AT2G16530:AT2G16530:3-oxo-5-alpha-steroid 4-dehydrogenase family protein__AT1G72590:AT1G72590:3-oxo-5-alpha-steroid 4-d… 1Chr11:8402144–8406496 (-)2.18e-12
Glyma.11G182600 hypothetical protein AT5G22400:AT5G22400:Rho GTPase activating protein with PAK-box/P21-Rho-binding domain-containing protein 1Chr11:24998933–25003549 (-)2.231e-11
Glyma.12G054700 hypothetical protein AT3G45140:LOX2:lipoxygenase 2 1Chr12:3949453–3957386 (-)2.904e-11
Glyma.12G095500 hypothetical protein AT3G44150:AT3G44150:Expp1 protein 1Chr12:8023570–8027770 (-)3.666e-11
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)8.062e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)8.062e-13
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)8.869e-11
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)4.214e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)5.441e-13
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)5.441e-13
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)5.441e-13
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)1.964e-13
Glyma.14G067800 hypothetical protein AT3G12380:ARP5:actin-related protein 5 1Chr14:5675792–5680343 (+)1.546e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)5.08e-11
Glyma.15G124000 hypothetical protein NA 1Chr15:9845097–9849312 (-)1.069e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)3.631e-14
Glyma.16G031600 hypothetical protein NA 1Chr16:2964569–2985013 (+)6.383e-13
Glyma.16G105100 hypothetical protein NA 1Chr16:21259552–21267517 (-)1.936e-11
Glyma.16G105400 hypothetical protein AT2G43040:NPG1:tetratricopeptide repeat (TPR)-containing protein 1Chr16:21357465–21364357 (-)3.004e-12
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.019e-12
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)2.673e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)1.609e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)1.609e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)1.609e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)1.609e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)6.358e-11
Glyma.16G117700 hypothetical protein NA 1Chr16:26279957–26283458 (+)5.086e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)3.186e-11
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)2.438e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.782e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)2.092e-11
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)2.896e-11
Glyma.16G210300 hypothetical protein AT1G73340:AT1G73340:Cytochrome P450 superfamily protein 1Chr16:36943073–36948828 (+)4.454e-12
Glyma.16G210400 hypothetical protein AT1G73350:AT1G73350:ankyrin repeat protein 1Chr16:36949685–36953467 (+)4.454e-12
Glyma.18G045700 hypothetical protein NA 1Chr18:3956176–3958846 (+)1.98e-11
Glyma.18G052100 hypothetical protein AT2G30470:HSI2:B3 domain-containing transcription repressor VAL1 1Chr18:4503897–4512049 (+)7.741e-11
Glyma.18G263900 hypothetical protein AT5G15410:DND1:Cyclic nucleotide-regulated ion channel family protein 1Chr18:54907058–54912936 (-)5.179e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)9.997e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)2.882e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)2.882e-11
Glyma.19G218100 hypothetical protein AT1G02390:GPAT2:glycerol-3-phosphate acyltransferase 2 1Chr19:47082133–47085750 (+)3.018e-11
Glyma.20G109800 hypothetical protein AT2G35130:AT2G35130:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr20:35213258–35219502 (+)7.743e-11