Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P24681

Metabolite ID
P24681
Deionized mass
374.1489 Da
Average m/z
375.1546
Average RT
14.4932
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
42
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

42 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G111500 hypothetical protein AT4G35500:AT4G35500:Protein kinase superfamily protein 4Chr16:24626024–24635513 (+)2.559e-13
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)2.132e-14
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 2Chr12:36289704–36295084 (-)2.602e-12
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.557e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.712e-13
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)9.56e-11
Glyma.05G034000 hypothetical protein AT4G03400:DFL2:Auxin-responsive GH3 family protein 1Chr05:2965889–2971412 (-)8.948e-12
Glyma.05G182500 hypothetical protein AT5G65210:TGA1:bZIP transcription factor family protein 1Chr05:37029299–37037313 (+)8.35e-11
Glyma.05G230200 hypothetical protein NA 1Chr05:40815058–40819434 (+)6.852e-11
Glyma.05G231800 ALDH2C1 aldehyde dehydrogenase family 2 member C1 AT3G24503:ALDH2C4:aldehyde dehydrogenase 2C4 1Chr05:40924505–40929251 (+)4.614e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.272e-14
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)4.405e-11
Glyma.07G021100 hypothetical protein NA 1Chr07:1647678–1650627 (+)7.445e-13
Glyma.07G021600 hypothetical protein AT5G48930:HCT:hydroxycinnamoyl-CoA shikimate/quinate hydroxycinnamoyl transferase 1Chr07:1673827–1680014 (-)7.445e-13
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)6.462e-13
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)4.562e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)2.946e-11
Glyma.08G118900 hypothetical protein NA 1Chr08:9180535–9184036 (+)7.229e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)9.361e-12
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)6.261e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)6.261e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)3.551e-14
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)3.551e-14
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)5.527e-13
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.712e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)4.452e-13
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)5.787e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)1.903e-11
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)9.56e-11
Glyma.14G198100 hypothetical protein NA 1Chr14:46337677–46340654 (+)1.384e-11
Glyma.14G201600 hypothetical protein NA 1Chr14:46703283–46706500 (+)2.034e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)2.034e-11
Glyma.16G111100 hypothetical protein NA 1Chr16:24438458–24444801 (+)2.559e-13
Glyma.16G111400 hypothetical protein AT4G35510:AT4G35510:PHD finger-like protein 1Chr16:24546422–24549336 (+)1.744e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.633e-11
Glyma.17G137100 hypothetical protein AT4G22860:AT4G22860:Cell cycle regulated microtubule associated protein 1Chr17:11065492–11072635 (+)7.703e-11
Glyma.18G230700 hypothetical protein AT3G61290:AT3G61290:O-glucosyltransferase rumi-like protein (DUF821) 1Chr18:51943730–51947645 (+)6.546e-11
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.138e-11
Glyma.19G188200 hypothetical protein NA 1Chr19:44647446–44649620 (-)9.252e-12
Glyma.19G245800 hypothetical protein AT3G04690:ANX1:Malectin/receptor-like protein kinase family protein 1Chr19:49263978–49267290 (+)1.395e-12
Glyma.19G246000 hypothetical protein AT3G04630:WDL1:WVD2-like 1 1Chr19:49272477–49277569 (-)1.776e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)4.017e-12