Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P22570

Metabolite ID
P22570
Deionized mass
426.0688 Da
Average m/z
427.0782
Average RT
13.8966
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
127
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

127 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.16G209300 hypothetical protein NA 4Chr16:36856833–36863994 (-)1.216e-12
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.708e-13
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 3Chr03:169480–172727 (+)1.567e-13
Glyma.13G134400 hypothetical protein AT2G37370:AT2G37370:centrosomal protein of 135 kDa-like protein 3Chr13:24677399–24693129 (-)7.298e-12
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)8.307e-11
Glyma.06G209300 hypothetical protein NA 2Chr06:20573671–20581076 (-)2.916e-11
Glyma.07G021800 hypothetical protein AT1G80920:J8:Chaperone DnaJ-domain superfamily protein 2Chr07:1697119–1698666 (+)1.392e-12
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)1.772e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)3.795e-14
Glyma.08G123500 hypothetical protein NA 2Chr08:9494946–9505931 (-)1.565e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)5.009e-14
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 2Chr12:36473422–36498915 (+)1.04e-13
Glyma.13G135700 hypothetical protein NA 2Chr13:24812720–24818735 (+)6.634e-12
Glyma.13G135800 hypothetical protein AT5G02800:CDL1:Protein kinase superfamily protein 2Chr13:24820151–24823999 (-)6.634e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)6.432e-12
Glyma.14G149300 hypothetical protein NA 2Chr14:32235308–32258014 (+)2.099e-11
Glyma.14G201600 hypothetical protein NA 2Chr14:46703283–46706500 (+)1.889e-12
Glyma.15G263500 hypothetical protein AT1G79440:ALDH5F1:aldehyde dehydrogenase 5F1 2Chr15:49664672–49682418 (+)1.231e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.708e-13
Glyma.02G204700 hypothetical protein AT4G30610:BRS1:alpha/beta-Hydrolases superfamily protein 1Chr02:38993365–39000790 (+)3.919e-11
Glyma.02G205300 hypothetical protein NA 1Chr02:39037472–39038396 (-)4.494e-11
Glyma.03G002100 hypothetical protein AT5G01930:MAN6:Glycosyl hydrolase superfamily protein 1Chr03:211934–216522 (+)1.424e-11
Glyma.03G002400 hypothetical protein AT5G25780:EIF3B-2:eukaryotic translation initiation factor 3B-2 1Chr03:234217–238375 (-)1.424e-11
Glyma.03G018600 hypothetical protein AT2G45695:AT2G45695:Ubiquitin related modifier 1 1Chr03:1859210–1862572 (-)2.771e-11
Glyma.03G018800 hypothetical protein AT2G45680:TCP9:TCP family transcription factor 1Chr03:1875182–1876855 (+)7.367e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.551e-14
Glyma.03G169700 hypothetical protein AT2G20240:TRM17:GPI-anchored adhesin-like protein, putative (DUF3741)__AT4G28760:TRM20:methyl-coenzyme M reductase II s… 1Chr03:38442950–38448706 (+)3.303e-11
Glyma.03G177700 hypothetical protein NA 1Chr03:39046772–39051158 (+)2.48e-11
Glyma.04G112200 hypothetical protein AT5G51750:SBT1.3:subtilase 1.3 1Chr04:12562882–12565006 (+)6.156e-11
Glyma.05G224500 hypothetical protein NA 1Chr05:40342583–40345336 (+)2.584e-11
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.373e-13
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.355e-13
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.807e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)3.454e-12
Glyma.06G081600 hypothetical protein AT5G11490:AT5G11490:adaptin family protein 1Chr06:6273644–6283819 (+)4.356e-11
Glyma.06G207900 hypothetical protein NA 1Chr06:20278974–20282107 (-)9.241e-11
Glyma.06G208000 hypothetical protein AT1G74000:SS3:strictosidine synthase 3 1Chr06:20286288–20288769 (+)9.242e-11
Glyma.06G208900 hypothetical protein NA 1Chr06:20515068–20521900 (-)9.241e-11
Glyma.06G209400 hypothetical protein NA 1Chr06:20622369–20629712 (+)9.241e-11
Glyma.06G209600 hypothetical protein AT1G48960:AT1G48960:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:20638577–20641470 (+)9.241e-11
Glyma.06G210000 hypothetical protein NA 1Chr06:20706632–20708144 (-)9.241e-11
Glyma.06G210100 hypothetical protein NA 1Chr06:20725481–20728890 (-)9.241e-11
Glyma.06G210400 hypothetical protein AT1G03280:AT1G03280:Transcription factor TFIIE, alpha subunit 1Chr06:20768340–20778709 (-)9.241e-11
Glyma.06G210900 hypothetical protein AT3G24330:AT3G24330:O-Glycosyl hydrolases family 17 protein 1Chr06:20942818–20945744 (+)9.241e-11
Glyma.06G211500 hypothetical protein AT5G19950:AT5G19950:tudor domain protein (DUF1767) 1Chr06:21104409–21114116 (-)9.241e-11
Glyma.06G211700 hypothetical protein NA 1Chr06:21226061–21226529 (-)7.273e-11
Glyma.06G211800 hypothetical protein NA 1Chr06:21237649–21239875 (+)7.273e-11
Glyma.06G213600 hypothetical protein NA 1Chr06:21713618–21726865 (+)7.273e-11
Glyma.06G291600 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr06:48024204–48029614 (+)3.444e-13
Glyma.06G291800 hypothetical protein NA 1Chr06:48044194–48047197 (-)2.013e-12
Glyma.06G292000 hypothetical protein NA 1Chr06:48081084–48084476 (-)3.444e-13
Glyma.06G292100 hypothetical protein NA 1Chr06:48095366–48097378 (+)3.444e-13
Glyma.06G292200 hypothetical protein AT5G44290:AT5G44290:Protein kinase superfamily protein 1Chr06:48100578–48107433 (-)2.013e-12
Glyma.06G292400 hypothetical protein AT4G28320:MAN5:Glycosyl hydrolase superfamily protein 1Chr06:48130296–48134955 (+)2.758e-11
Glyma.06G292900 hypothetical protein AT4G03540:AT4G03540:Uncharacterized protein family (UPF0497) 1Chr06:48170133–48173010 (-)8.557e-11
Glyma.07G021700 hypothetical protein NA 1Chr07:1684537–1692320 (+)5.683e-11
Glyma.07G034300 hypothetical protein NA 1Chr07:2701469–2717662 (-)3.668e-11
Glyma.08G016700 hypothetical protein AT1G63840:AT1G63840:RING/U-box superfamily protein 1Chr08:1330226–1331366 (-)6.604e-12
Glyma.08G114700 hypothetical protein AT3G13600:AT3G13600:calmodulin-binding family protein 1Chr08:8768854–8772973 (-)1.167e-11
Glyma.08G114800 hypothetical protein AT5G19830:AT5G19830:Peptidyl-tRNA hydrolase family protein 1Chr08:8792663–8798214 (-)1.856e-11
Glyma.08G115400 hypothetical protein NA 1Chr08:8848959–8851344 (+)5.219e-11
Glyma.08G115700 hypothetical protein AT1G29120:AT1G29120:Hydrolase-like protein family 1Chr08:8868075–8876513 (+)2.132e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)1.108e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)3.795e-14
Glyma.08G118500 hypothetical protein NA 1Chr08:9161382–9162471 (+)6.231e-11
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)9.338e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)2.569e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)1.565e-11
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)1.565e-11
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)1.565e-11
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)1.565e-11
Glyma.08G146100 hypothetical protein NA 1Chr08:11119305–11124078 (+)5.717e-11
Glyma.08G183700 Fasciclin-like arabinogalactan protein 19 NA 1Chr08:14738283–14742033 (+)4.12e-11
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)2.08e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.186e-11
Glyma.08G330400 hypothetical protein NA 1Chr08:44820327–44823668 (+)7.122e-11
Glyma.08G330500 hypothetical protein AT3G07680:p24beta2:emp24/gp25L/p24 family/GOLD family protein 1Chr08:44824324–44827127 (-)7.122e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)8.513e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)8.254e-11
Glyma.10G080400 hypothetical protein AT2G33990:iqd9:IQ-domain 9 1Chr10:9454616–9455485 (+)4.575e-11
Glyma.10G081200 hypothetical protein NA 1Chr10:9600771–9603988 (-)9.971e-11
Glyma.10G081300 hypothetical protein NA 1Chr10:9621308–9625766 (-)4.575e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)7.222e-11
Glyma.11G064300 hypothetical protein AT4G36780:BEH2:BES1/BZR1 homolog 2 1Chr11:4849799–4851673 (+)2.503e-11
Glyma.11G161900 hypothetical protein NA 1Chr11:14992307–14994409 (-)1.418e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)5.707e-16
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)5.707e-16
Glyma.12G114500 hypothetical protein AT4G22930:PYR4:pyrimidin 4 1Chr12:11396572–11400825 (-)7.199e-13
Glyma.12G114900 hypothetical protein NA 1Chr12:11457987–11462951 (-)7.199e-13
Glyma.12G198700 hypothetical protein AT5G62990:emb1692:Ubiquitin carboxyl-terminal hydrolase family protein 1Chr12:36001658–36004086 (+)9.758e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.37e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.37e-12
Glyma.12G202400 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:36289704–36295084 (-)7.637e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.136e-14
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)1.04e-13
Glyma.12G204600 hypothetical protein AT4G28310:AT4G28310:microtubule-associated protein 1Chr12:36504234–36505245 (+)9.615e-12
Glyma.12G205900 hypothetical protein NA 1Chr12:36622011–36625824 (+)8.387e-12
Glyma.13G095000 hypothetical protein NA 1Chr13:21005327–21006774 (-)4.003e-13
Glyma.13G134300 hypothetical protein NA 1Chr13:24664171–24665742 (-)7.298e-12
Glyma.13G134500 hypothetical protein AT3G09560:PAH1:Lipin family protein 1Chr13:24696109–24705068 (-)5.519e-11
Glyma.13G135300 hypothetical protein NA 1Chr13:24770681–24773826 (+)4.017e-11
Glyma.13G135400 hypothetical protein AT5G12130:PDE149:integral membrane TerC family protein 1Chr13:24786242–24791938 (+)4.017e-11
Glyma.13G135500 hypothetical protein AT5G02780:GSTL1:glutathione transferase lambda 1 1Chr13:24798567–24801567 (+)6.634e-12
Glyma.14G071600 hypothetical protein AT1G27620:AT1G27620:HXXXD-type acyl-transferase family protein 1Chr14:6016839–6019954 (+)1.192e-11
Glyma.14G094900 hypothetical protein AT1G60960:IRT3:iron regulated transporter 3 1Chr14:8824846–8827258 (-)6.005e-12
Glyma.14G148800 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr14:32154755–32157298 (+)2.099e-11
Glyma.14G201700 hypothetical protein NA 1Chr14:46711634–46715644 (-)1.889e-12
Glyma.15G262200 hypothetical protein AT3G12760:AT3G12760:defective in cullin neddylation protein 1Chr15:49465185–49472595 (-)5.693e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)8.307e-11
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)8.305e-11
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)8.307e-11
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)8.307e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)4.365e-11
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)2.905e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)9.446e-14
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)3.548e-14
Glyma.16G173000 hypothetical protein NA 1Chr16:33365497–33367017 (+)4.124e-12
Glyma.16G182600 hypothetical protein AT5G52400:CYP715A1:cytochrome P450, family 715, subfamily A, polypeptide 1 1Chr16:34364037–34367765 (-)3.757e-12
Glyma.16G205600 hypothetical protein AT4G10280:AT4G10280:RmlC-like cupins superfamily protein__AT4G10290:AT4G10290:RmlC-like cupins superfamily protein 1Chr16:36633000–36634978 (+)3.035e-12
Glyma.16G208500 EIF6 AT3G55620:eIF6A:Translation initiation factor IF6 1Chr16:36806718–36809299 (+)9.631e-12
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)3.265e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)3.265e-11
Glyma.19G127500 hypothetical protein NA 1Chr19:38615244–38616720 (-)1.241e-11
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)1.129e-11
Glyma.20G019800 hypothetical protein AT1G49350:AT1G49350:pfkB-like carbohydrate kinase family protein 1Chr20:2051817–2057262 (+)8.977e-13
Glyma.20G106900 hypothetical protein NA 1Chr20:34962043–34967985 (+)6.266e-11
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 1Chr20:34984922–34988496 (+)1.842e-12