Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P21688

Metabolite ID
P21688
Deionized mass
422.2175 Da
Average m/z
423.2250
Average RT
13.6507
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
70
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

70 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.04G096100 hypothetical protein AT1G58230:AT1G58230:binding protein 14Chr04:8566631–8625328 (+)2.195e-11
Glyma.04G096800 hypothetical protein AT4G24460:CLT2:CRT (chloroquine-resistance transporter)-like transporter 2 6Chr04:8747857–8778229 (-)7.689e-12
Glyma.04G096300 hypothetical protein NA 3Chr04:8635554–8654734 (+)7.102e-12
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)3.437e-11
Glyma.04G096500 hypothetical protein NA 2Chr04:8664088–8675605 (+)7.689e-12
Glyma.04G096600 hypothetical protein AT1G58250:SAB:HYPERSENSITIVE TO PI STARVATION 4 2Chr04:8693806–8724007 (-)7.689e-12
Glyma.09G057000 hypothetical protein NA 2Chr09:5140625–5145658 (+)1.213e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.037e-12
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)8.536e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)8.357e-11
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)3.437e-11
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.159e-12
Glyma.04G096200 hypothetical protein AT4G24470:ZIM:GATA-type zinc finger protein with TIFY domain-containing protein 1Chr04:8627546–8632713 (+)8.875e-11
Glyma.04G096900 hypothetical protein NA 1Chr04:8778953–8796458 (-)7.689e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)4.091e-12
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)8.654e-11
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)2.047e-14
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.376e-15
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)9.822e-13
Glyma.06G085200 hypothetical protein NA 1Chr06:6540849–6545557 (+)2.038e-13
Glyma.06G125200 hypothetical protein AT4G27940:MTM1:manganese tracking factor for mitochondrial SOD2 1Chr06:10209787–10215982 (+)4.664e-12
Glyma.06G125300 hypothetical protein AT5G24105:AGP41:arabinogalactan protein 41 1Chr06:10216506–10218901 (-)4.664e-12
Glyma.06G201700 hypothetical protein NA 1Chr06:18577883–18617874 (+)3.86e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)2.367e-11
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)6.987e-12
Glyma.08G119300 hypothetical protein AT1G29330:ERD2:ER lumen protein retaining receptor family protein 1Chr08:9198213–9201688 (-)2.136e-11
Glyma.09G056100 hypothetical protein AT2G18915:LKP2:LOV KELCH protein 2 1Chr09:5011260–5022738 (-)1.582e-11
Glyma.09G056900 hypothetical protein NA 1Chr09:5128829–5132737 (+)1.48e-11
Glyma.09G057300 hypothetical protein AT5G57330:AT5G57330:Galactose mutarotase-like superfamily protein 1Chr09:5164998–5171598 (-)6.082e-13
Glyma.09G057400 hypothetical protein AT5G57320:VLN5:actin filament bundling protein P-115-ABP protein 1Chr09:5173554–5193820 (-)8.833e-13
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.324e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)1.367e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.988e-13
Glyma.11G000700 hypothetical protein AT4G34150:AT4G34150:Calcium-dependent lipid-binding (CaLB domain) family protein 1Chr11:33497–35198 (+)3.918e-11
Glyma.11G015300 hypothetical protein AT3G60500:CER7:3'-5'-exoribonuclease family protein 1Chr11:1048122–1055388 (+)1.01e-12
Glyma.11G015900 hypothetical protein AT5G12410:AT5G12410:THUMP domain-containing protein 1Chr11:1113088–1117922 (+)1.856e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)1.077e-11
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)1.077e-11
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)2.966e-11
Glyma.13G197700 hypothetical protein AT5G38730:AT5G38730:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr13:31174654–31180595 (-)1.548e-12
Glyma.13G201600 hypothetical protein NA 1Chr13:31521512–31522992 (+)1.498e-11
Glyma.13G203200 hypothetical protein AT3G52105:AT3G52105:DIS3-exonuclease-like protein 1Chr13:31720004–31725252 (+)6.044e-11
Glyma.13G203300 hypothetical protein AT3G63530:BB:RING/U-box superfamily protein 1Chr13:31727841–31735910 (-)6.045e-11
Glyma.13G203700 hypothetical protein NA 1Chr13:31780982–31784218 (+)6.044e-11
Glyma.13G203900 hypothetical protein NA 1Chr13:31793697–31796601 (-)9.916e-12
Glyma.13G319600 hypothetical protein AT5G22740:CSLA02:cellulose synthase-like A02 1Chr13:41398196–41403950 (-)1.901e-11
Glyma.13G319700 hypothetical protein NA 1Chr13:41414504–41418957 (+)8.466e-11
Glyma.14G069500 hypothetical protein AT5G37810:NIP4;1:NOD26-like intrinsic protein 4;1 1Chr14:5822246–5825628 (-)1.884e-11
Glyma.16G093700 hypothetical protein NA 1Chr16:15100987–15107038 (+)6.38e-14
Glyma.16G093800 hypothetical protein NA 1Chr16:15144247–15160454 (-)6.38e-14
Glyma.16G094200 hypothetical protein NA 1Chr16:15770075–15772475 (-)6.38e-14
Glyma.16G094300 hypothetical protein AT5G44650:CEST:death domain associated protein 1Chr16:15796268–15811033 (-)6.38e-14
Glyma.16G094500 hypothetical protein AT1G30825:DIS2:Arp2/3 complex, 34 kD subunit p34-Arc 1Chr16:15914865–15930406 (-)6.38e-14
Glyma.16G095100 hypothetical protein AT1G32080:LrgB:uncharacterized protein 1Chr16:16891012–16896814 (-)6.38e-14
Glyma.16G095200 hypothetical protein AT2G35530:bZIP16:basic region/leucine zipper transcription factor 16 1Chr16:16911412–16924907 (-)6.38e-14
Glyma.16G096000 Site-2 protease AT4G20310:AT4G20310:Peptidase M50 family protein 1Chr16:17694666–17720668 (+)6.38e-14
Glyma.16G096600 hypothetical protein AT5G58140:PHOT2:phototropin 2 1Chr16:18621149–18647713 (-)6.38e-14
Glyma.16G096900 hypothetical protein AT1G68690:PERK9:Protein kinase superfamily protein 1Chr16:18767931–18777350 (-)6.38e-14
Glyma.16G097800 hypothetical protein NA 1Chr16:18963735–18965227 (-)2.861e-11
Glyma.16G098100 hypothetical protein AT2G24200:LAP1:Cytosol aminopeptidase family protein 1Chr16:18973369–18985630 (+)2.861e-11
Glyma.16G098400 hypothetical protein NA 1Chr16:18995593–18996330 (-)2.861e-11
Glyma.16G099100 hypothetical protein AT5G06350:AT5G06350:ARM repeat superfamily protein 1Chr16:19072070–19086771 (+)2.861e-11
Glyma.16G139500 hypothetical protein AT5G66550:AT5G66550:Maf-like protein 1Chr16:29686243–29690410 (-)3.161e-12
Glyma.16G179800 hypothetical protein AT5G52520:OVA6:Class II aaRS and biotin synthetases superfamily protein 1Chr16:34022480–34027055 (-)1.125e-11
Glyma.16G189100 hypothetical protein AT1G05190:emb2394:Ribosomal protein L6 family 1Chr16:35170253–35173950 (-)5.018e-11
Glyma.17G211500 hypothetical protein AT4G32272:AT4G32272:Nucleotide/sugar transporter family protein 1Chr17:34916813–34922875 (+)9.262e-11
Glyma.18G073500 hypothetical protein AT3G44730:KP1:kinesin-like protein 1 1Chr18:6971929–6982758 (+)7.902e-12
Glyma.18G266100 hypothetical protein NA 1Chr18:55052591–55056489 (-)1.597e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.144e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.144e-11