Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P19063

Metabolite ID
P19063
Deionized mass
227.0799 Da
Average m/z
228.0860
Average RT
12.9266
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
72
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

72 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)4.189e-13
Glyma.06G305700 hypothetical protein AT2G05710:ACO3:aconitase 3 3Chr06:49451501–49461369 (-)2.48e-12
Glyma.08G123500 hypothetical protein NA 3Chr08:9494946–9505931 (-)6.733e-12
Glyma.09G274700 hypothetical protein NA 2Chr09:49057465–49065986 (-)3.651e-11
Glyma.09G275800 hypothetical protein NA 2Chr09:49116424–49122191 (-)3.651e-11
Glyma.09G276100 hypothetical protein AT2G38510:AT2G38510:MATE efflux family protein 2Chr09:49139110–49143810 (-)3.651e-11
Glyma.10G028700 hypothetical protein AT1G03090:MCCA:methylcrotonyl-CoA carboxylase alpha chain 2Chr10:2485817–2497071 (-)1.083e-12
Glyma.14G093100 hypothetical protein NA 2Chr14:8654730–8655892 (-)2.72e-15
Glyma.16G209300 hypothetical protein NA 2Chr16:36856833–36863994 (-)2.665e-11
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)4.189e-13
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)2.389e-16
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)4.63e-13
Glyma.20G107200 hypothetical protein AT4G38540:AT4G38540:FAD/NAD(P)-binding oxidoreductase family protein 2Chr20:34984922–34988496 (+)3.554e-13
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)6.817e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)6.817e-11
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)1.869e-13
Glyma.04G084200 hypothetical protein AT2G25830:AT2G25830:YebC-like protein 1Chr04:7137351–7146570 (-)7.215e-14
Glyma.04G237000 hypothetical protein AT1G31910:AT1G31910:GHMP kinase family protein 1Chr04:50558708–50569783 (+)3.485e-11
Glyma.04G237200 hypothetical protein AT3G52210:AT3G52210:S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 1Chr04:50576216–50582296 (-)3.485e-11
Glyma.04G237500 hypothetical protein AT5G15940:AT5G15940:NAD(P)-binding Rossmann-fold superfamily protein__AT5G04070:AT5G04070:NAD(P)-binding Rossmann-fold … 1Chr04:50604264–50609423 (+)3.485e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)2.518e-12
Glyma.05G224700 hypothetical protein NA 1Chr05:40351005–40361888 (+)2.959e-12
Glyma.05G226000 hypothetical protein AT5G19730:AT5G19730:Pectin lyase-like superfamily protein 1Chr05:40458098–40461736 (+)4.711e-12
Glyma.05G236400 hypothetical protein AT1G23210:GH9B6:glycosyl hydrolase 9B6__AT1G70710:GH9B1:glycosyl hydrolase 9B1 1Chr05:41274513–41279615 (-)3.651e-13
Glyma.05G236700 hypothetical protein AT4G33760:AT4G33760:tRNA synthetase class II (D, K and N) family protein 1Chr05:41301540–41310727 (+)1.95e-14
Glyma.05G237800 hypothetical protein AT1G48790:AMSH1:associated molecule with the SH3 domain of STAM 1 1Chr05:41406807–41413022 (-)2.094e-11
Glyma.06G305300 hypothetical protein NA 1Chr06:49431590–49435985 (-)2.481e-12
Glyma.06G305600 hypothetical protein NA 1Chr06:49446542–49450635 (-)2.481e-12
Glyma.06G313500 hypothetical protein NA 1Chr06:50191600–50203098 (-)1.65e-13
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.707e-11
Glyma.08G122200 hypothetical protein NA 1Chr08:9416766–9429995 (-)6.733e-12
Glyma.08G122300 hypothetical protein AT1G29390:COR314-TM2:cold regulated 314 thylakoid membrane 2 1Chr08:9435391–9437279 (+)6.733e-12
Glyma.08G122500 hypothetical protein NA 1Chr08:9441329–9445315 (-)6.733e-12
Glyma.08G122700 hypothetical protein AT1G29350:AT1G29350:RNA polymerase II degradation factor-like protein (DUF1296) 1Chr08:9452604–9458932 (+)6.733e-12
Glyma.08G204800 hypothetical protein AT3G16140:PSAH-1:photosystem I subunit H-1 1Chr08:16601039–16602646 (+)1.27e-12
Glyma.08G211800 hypothetical protein NA 1Chr08:17104514–17105442 (-)1.768e-11
Glyma.09G016500 hypothetical protein NA 1Chr09:1274652–1276853 (-)7.647e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)5.117e-12
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)5.817e-15
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)8.203e-14
Glyma.09G270400 hypothetical protein NA 1Chr09:48735991–48740879 (+)3.176e-11
Glyma.09G270500 hypothetical protein AT1G09780:iPGAM1:Phosphoglycerate mutase, 2,3-bisphosphoglycerate-independent 1Chr09:48745649–48751140 (+)8.367e-12
Glyma.09G274900 hypothetical protein AT5G02280:AT5G02280:SNARE-like superfamily protein 1Chr09:49069946–49073277 (-)3.651e-11
Glyma.09G275100 hypothetical protein AT3G08760:ATSIK:Protein kinase superfamily protein 1Chr09:49079101–49084269 (-)3.651e-11
Glyma.09G275300 hypothetical protein NA 1Chr09:49094668–49096996 (-)3.651e-11
Glyma.09G275500 hypothetical protein NA 1Chr09:49105837–49106989 (+)1.887e-11
Glyma.09G275900 hypothetical protein AT5G01850:AT5G01850:Protein kinase superfamily protein 1Chr09:49128687–49133154 (-)3.651e-11
Glyma.09G276000 hypothetical protein NA 1Chr09:49131662–49132187 (+)3.651e-11
Glyma.09G282900 hypothetical protein AT2G29090:CYP707A2:cytochrome P450, family 707, subfamily A, polypeptide 2 1Chr09:49863377–49871270 (+)7.783e-11
Glyma.10G028500 hypothetical protein NA 1Chr10:2476846–2478953 (+)1.083e-12
Glyma.10G028600 hypothetical protein NA 1Chr10:2487313–2489838 (+)3.792e-11
Glyma.10G037300 hypothetical protein AT3G54670:TTN8:Structural maintenance of chromosomes (SMC) family protein 1Chr10:3270545–3283318 (-)1.436e-11
Glyma.10G081700 hypothetical protein NA 1Chr10:9752508–9758422 (+)4.177e-11
Glyma.12G049300 hypothetical protein NA 1Chr12:3538428–3539170 (-)3.524e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.932e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.932e-11
Glyma.13G181100 hypothetical protein AT2G47960:AT2G47960:trafficking protein particle complex subunit-like protein 1Chr13:29426889–29433599 (-)3.934e-12
Glyma.14G071700 hypothetical protein AT1G19660:AT1G19660:Wound-responsive family protein__AT1G75380:BBD1:bifunctional nuclease in basal defense response 1 1Chr14:6037810–6041899 (+)3.472e-11
Glyma.14G071800 hypothetical protein NA 1Chr14:6040746–6041899 (-)3.472e-11
Glyma.15G049800 hypothetical protein NA 1Chr15:3927843–3933656 (-)6.664e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)7.148e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 1Chr16:26324650–26336836 (+)5.644e-11
Glyma.16G119300 hypothetical protein NA 1Chr16:26643902–26644416 (+)6.936e-11
Glyma.17G004500 hypothetical protein AT5G47800:AT5G47800:Phototropic-responsive NPH3 family protein 1Chr17:444580–451107 (-)6.352e-11
Glyma.17G005900 hypothetical protein AT4G17215:AT4G17215:Pollen Ole e 1 allergen and extensin family protein__AT2G40113:AT2G40113:Pollen Ole e 1 allergen an… 1Chr17:546212–548525 (+)6.352e-11
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)5.776e-11
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)5.776e-11
Glyma.17G215500 KNAT5 NA 1Chr17:36212363–36217688 (-)5.082e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.443e-13
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.443e-13
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)5.352e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)4.978e-11