Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P15328

Metabolite ID
P15328
Deionized mass
577.1761 Da
Average m/z
578.1849
Average RT
11.9685
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
63
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

63 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.19G027000 hypothetical protein NA 4Chr19:3335896–3343744 (+)9.231e-20
Glyma.16G114900 hypothetical protein NA 3Chr16:25456379–25485759 (+)5.817e-13
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 3Chr16:26356863–26371741 (-)1.268e-11
Glyma.12G203700 hypothetical protein AT4G28260:AT4G28260:acyl-UDP-N-acetylglucosamine O-acyltransferase 2Chr12:36406747–36413696 (+)3.349e-11
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)6.024e-15
Glyma.19G026600 hypothetical protein AT4G13700:PAP23:purple acid phosphatase 23 2Chr19:3303658–3312907 (-)9.231e-20
Glyma.19G029600 hypothetical protein NA 2Chr19:3681517–3690884 (-)5.626e-17
Glyma.19G029800 hypothetical protein NA 2Chr19:3724518–3729860 (-)1.584e-15
Glyma.03G001500 B15-3-5 AT2G38600:AT2G38600:HAD superfamily, subfamily IIIB acid phosphatase 1Chr03:169480–172727 (+)3.952e-12
Glyma.03G023000 hypothetical protein AT4G00220:JLO:Lateral organ boundaries (LOB) domain family protein 1Chr03:2423540–2428634 (-)2.441e-12
Glyma.03G209700 hypothetical protein NA 1Chr03:41646792–41648527 (+)4.658e-12
Glyma.05G127500 hypothetical protein NA 1Chr05:32041345–32049554 (+)3.565e-11
Glyma.05G127800 hypothetical protein AT4G18240:SS4:starch synthase 4 1Chr05:32125404–32138244 (+)7.57e-11
Glyma.05G127900 SAD1 AT5G48870:SAD1:Small nuclear ribonucleoprotein family protein 1Chr05:32139620–32141770 (-)7.57e-11
Glyma.05G128200 hypothetical protein AT5G46330:FLS2:Leucine-rich receptor-like protein kinase family protein 1Chr05:32158034–32162343 (-)7.57e-11
Glyma.05G149900 hypothetical protein NA 1Chr05:34389242–34393621 (-)4.284e-12
Glyma.06G112300 hypothetical protein AT1G44780:AT1G44780:translation initiation factor__AT4G08310:AT4G08310:DNA ligase 1Chr06:9113982–9118848 (-)2.835e-14
Glyma.06G112600 hypothetical protein AT1G77620:AT1G77620:P-loop containing nucleoside triphosphate hydrolases superfamily protein 1Chr06:9134358–9144986 (+)2.835e-14
Glyma.06G112700 hypothetical protein AT1G44760:AT1G44760:Adenine nucleotide alpha hydrolases-like superfamily protein 1Chr06:9156973–9158659 (+)2.835e-14
Glyma.07G015700 hypothetical protein AT1G79750:NADP-ME4:NADP-malic enzyme 4 1Chr07:1244977–1251198 (-)1.426e-11
Glyma.08G239500 hypothetical protein AT4G09180:FBH2:basic helix-loop-helix (bHLH) DNA-binding superfamily protein 1Chr08:20444715–20447665 (-)2.898e-11
Glyma.09G016800 hypothetical protein NA 1Chr09:1300913–1311894 (+)8.724e-11
Glyma.09G062900 hypothetical protein NA 1Chr09:6004419–6011041 (+)9.846e-11
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)1.233e-18
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)4.444e-13
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)6.538e-12
Glyma.12G007800 hypothetical protein NA 1Chr12:572469–583974 (+)7.93e-11
Glyma.12G108600 hypothetical protein NA 1Chr12:9994609–9997302 (-)6.888e-12
Glyma.12G109500 hypothetical protein AT4G03415:PP2C52:Protein phosphatase 2C family protein 1Chr12:10308026–10314332 (-)6.888e-12
Glyma.12G202200 hypothetical protein AT2G20860:LIP1:lipoic acid synthase 1 1Chr12:36267599–36271584 (+)4.317e-12
Glyma.12G202300 hypothetical protein NA 1Chr12:36275438–36276838 (+)4.317e-12
Glyma.12G203600 EXPB8 AT2G20750:EXPB1:expansin B1 1Chr12:36390283–36394245 (-)1.529e-11
Glyma.12G204000 hypothetical protein AT1G03687:AT1G03687:DTW domain-containing protein 1Chr12:36428558–36432835 (+)9.403e-11
Glyma.12G204400 hypothetical protein AT4G03560:TPC1:two-pore channel 1 1Chr12:36473422–36498915 (+)9.403e-11
Glyma.14G205100 hypothetical protein NA 1Chr14:47020646–47026852 (+)9.626e-12
Glyma.15G124500 MLO-like protein 13 AT4G24250:MLO13:Seven transmembrane MLO family protein 1Chr15:9888761–9894068 (-)7.308e-11
Glyma.16G020200 hypothetical protein NA 1Chr16:1828561–1835982 (-)9.484e-11
Glyma.16G041700 hypothetical protein AT1G64770:PnsB2:NDH-dependent cyclic electron flow 1 1Chr16:3909907–3912569 (+)1.554e-11
Glyma.16G115300 hypothetical protein NA 1Chr16:25584135–25585667 (+)5.817e-13
Glyma.16G115400 hypothetical protein NA 1Chr16:25604547–25606360 (+)5.817e-13
Glyma.16G115500 hypothetical protein NA 1Chr16:25622503–25630816 (+)5.817e-13
Glyma.16G115600 hypothetical protein AT1G13410:AT1G13410:Tetratricopeptide repeat (TPR)-like superfamily protein 1Chr16:25661245–25664376 (-)5.817e-13
Glyma.16G116200 hypothetical protein AT4G35560:DAW1:Transducin/WD40 repeat-like superfamily protein 1Chr16:25892277–25904773 (+)7.768e-11
Glyma.16G116500 hypothetical protein AT4G16444:AT4G16444:tail-anchored protein insertion receptor WRB-like protein 1Chr16:26057276–26069534 (+)8.595e-12
Glyma.16G117400 hypothetical protein NA 1Chr16:26234552–26238233 (-)1.002e-13
Glyma.16G118200 hypothetical protein NA 1Chr16:26337169–26338323 (+)1.268e-11
Glyma.16G118600 hypothetical protein NA 1Chr16:26442194–26445922 (+)1.268e-11
Glyma.16G119400 hypothetical protein NA 1Chr16:26684278–26687087 (+)1.125e-15
Glyma.17G064000 hypothetical protein AT2G18840:AT2G18840:Integral membrane Yip1 family protein__AT4G30260:AT4G30260:Integral membrane Yip1 family protein 1Chr17:4924830–4930155 (-)2.022e-12
Glyma.17G064200 hypothetical protein AT5G57500:AT5G57500:Galactosyltransferase family protein 1Chr17:4943412–4944357 (-)2.022e-12
Glyma.18G200500 hypothetical protein AT3G51860:CAX3:cation exchanger 3 1Chr18:48016361–48020799 (-)5.099e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)3.996e-11
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)3.996e-11
Glyma.19G027700 hypothetical protein AT5G15440:EDL1:EID1-like 1 1Chr19:3471299–3475645 (+)3.212e-12
Glyma.19G028100 hypothetical protein AT3G01040:GAUT13:galacturonosyltransferase 13 1Chr19:3511914–3519141 (+)1.968e-12
Glyma.19G030100 hypothetical protein NA 1Chr19:3732644–3733945 (+)5.342e-12
Glyma.19G030500 GmAT133 NA 1Chr19:3779017–3781453 (-)5.342e-12
Glyma.19G031100 hypothetical protein AT3G02170:LNG2:longifolia2 1Chr19:3839225–3845784 (-)7.233e-13
Glyma.19G031200 hypothetical protein NA 1Chr19:3870532–3874170 (-)1.874e-11
Glyma.19G032500 hypothetical protein NA 1Chr19:4140729–4141955 (-)2.43e-11
Glyma.19G032800 hypothetical protein NA 1Chr19:4196959–4199265 (-)1.81e-12
Glyma.20G098200 hypothetical protein AT1G56345:AT1G56345:Pseudouridine synthase family protein 1Chr20:34140611–34141832 (+)2.54e-11
Glyma.20G098400 hypothetical protein AT1G56340:CRT1a:calreticulin 1a__AT1G09210:CRT1b:calreticulin 1b 1Chr20:34151918–34155417 (+)1.026e-11