Soybean mGWAS DBExplore The Genetic Basis Of Soybean Metabolism Glycine max
Overview Annotation GWAS Evidence Associated genes

P13297

Metabolite ID
P13297
Deionized mass
378.0524 Da
Average m/z
379.0609
Average RT
11.4114
Adduct
[M+H]+
Association scope
Overlapping genes only
Associated genes
46
GWAS result file
Available
Open in Soybean Metabolome Repository

Candidate annotations

Search compound candidates by deionized mass and tolerance. Follow compound IDs for database records, or use name searches to explore chemistry and soybean literature. About candidate annotations

GWAS Evidence

Dataset: indexed GWAS records.

Settings

SNP counts, plot highlights, gene associations and downloads use P < 10⁻¹⁰. Changing the threshold updates this page together.

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Associated genes

46 genes linked to SNP records with P < 10⁻¹⁰ in the selected scope. Supporting SNP records are counted per feature–gene pair.

Gene ID Alias Description Arabidopsis ortholog Supporting SNP recordsGene interval (1-based)Minimum P
Glyma.08G147300 hypothetical protein NA 3Chr08:11238871–11242682 (+)1.533e-16
Glyma.01G126800 hypothetical protein NA 2Chr01:43602195–43612710 (+)4.113e-12
Glyma.08G117400 hypothetical protein AT4G18750:DOT4:Pentatricopeptide repeat (PPR) superfamily protein 2Chr08:9054060–9063297 (+)8.809e-12
Glyma.08G117500 hypothetical protein AT4G18780:IRX1:cellulose synthase family protein 2Chr08:9065033–9071774 (-)2.068e-13
Glyma.16G118100 hypothetical protein AT2G17570:cPT1:Undecaprenyl pyrophosphate synthetase family protein 2Chr16:26324650–26336836 (+)1.33e-12
Glyma.16G196900 hypothetical protein NA 2Chr16:35841279–35846894 (-)9.748e-11
Glyma.01G039600 hypothetical protein NA 1Chr01:4300332–4302844 (-)6.76e-13
Glyma.01G045400 hypothetical protein NA 1Chr01:5140834–5144197 (-)9.157e-11
Glyma.01G119600 SLE3 AT2G40170:GEA6:Stress induced protein 1Chr01:41172520–41174209 (-)8.706e-11
Glyma.01G120000 hypothetical protein NA 1Chr01:41270985–41274854 (+)4.698e-13
Glyma.01G121400 hypothetical protein AT5G01400:ESP4:HEAT repeat-containing protein 1Chr01:41808055–41828625 (-)2.78e-11
Glyma.01G123900 hypothetical protein AT3G51770:ETO1:tetratricopeptide repeat (TPR)-containing protein 1Chr01:42831758–42837350 (+)5.829e-14
Glyma.01G124100 hypothetical protein NA 1Chr01:42886229–42892204 (-)2.363e-13
Glyma.01G124800 hypothetical protein AT2G38320:TBL34:TRICHOME BIREFRINGENCE-LIKE 34 1Chr01:43072403–43076304 (+)2.059e-13
Glyma.01G125400 hypothetical protein NA 1Chr01:43394231–43404097 (-)2.059e-13
Glyma.01G125500 hypothetical protein NA 1Chr01:43398981–43401979 (+)2.059e-13
Glyma.01G126000 hypothetical protein AT5G01650:AT5G01650:Tautomerase/MIF superfamily protein 1Chr01:43477322–43480661 (-)2.059e-13
Glyma.01G126300 hypothetical protein NA 1Chr01:43513210–43516682 (-)2.059e-13
Glyma.01G126400 hypothetical protein NA 1Chr01:43526917–43529405 (-)2.059e-13
Glyma.01G126500 hypothetical protein NA 1Chr01:43543307–43549330 (-)2.059e-13
Glyma.01G126900 hypothetical protein NA 1Chr01:43632082–43635399 (+)4.113e-12
Glyma.01G169700 hypothetical protein AT4G36410:UBC17:ubiquitin-conjugating enzyme 17 1Chr01:50715084–50719427 (-)1.937e-11
Glyma.01G169800 hypothetical protein AT4G36400:D2HGDH:FAD-linked oxidases family protein 1Chr01:50726088–50733347 (-)1.937e-11
Glyma.08G117100 hypothetical protein AT2G34190:AT2G34190:Xanthine/uracil permease family protein 1Chr08:9032236–9036159 (+)7.884e-11
Glyma.08G118400 hypothetical protein AT4G18810:AT4G18810:NAD(P)-binding Rossmann-fold superfamily protein 1Chr08:9147404–9153858 (-)2.068e-13
Glyma.08G118600 hypothetical protein AT1G29300:UNE1:intracellular protein transporter, putative (DUF641) 1Chr08:9169843–9172229 (-)5.213e-12
Glyma.08G133200 hypothetical protein AT5G65290:AT5G65290:LMBR1-like membrane protein 1Chr08:10216492–10225153 (-)5.29e-11
Glyma.08G133300 hypothetical protein NA 1Chr08:10224438–10225195 (+)5.29e-11
Glyma.08G145700 hypothetical protein AT5G64730:AT5G64730:Transducin/WD40 repeat-like superfamily protein 1Chr08:11083230–11086950 (-)4.752e-11
Glyma.08G145900 hypothetical protein AT4G39330:CAD9:cinnamyl alcohol dehydrogenase 9 1Chr08:11092669–11096142 (-)4.752e-11
Glyma.08G146000 hypothetical protein AT5G09850:AT5G09850:Transcription elongation factor (TFIIS) family protein 1Chr08:11103557–11106499 (+)1.848e-11
Glyma.08G146100 hypothetical protein NA 1Chr08:11119305–11124078 (+)1.45e-13
Glyma.08G146300 hypothetical protein AT5G09820:AT5G09820:Plastid-lipid associated protein PAP / fibrillin family protein 1Chr08:11136129–11139057 (-)3.044e-11
Glyma.08G147200 hypothetical protein AT3G18710:PUB29:plant U-box 29__AT5G64660:CMPG2:CYS, MET, PRO, and GLY protein 2 1Chr08:11225587–11227445 (+)4.748e-13
Glyma.08G147400 hypothetical protein AT1G48870:AT1G48870:Transducin/WD40 repeat-like superfamily protein 1Chr08:11248804–11251957 (+)5.222e-12
Glyma.09G080200 hypothetical protein NA 1Chr09:9256042–9263239 (-)4.675e-11
Glyma.09G082000 hypothetical protein NA 1Chr09:9638564–9650178 (+)3.848e-12
Glyma.09G084300 hypothetical protein AT2G34680:AIR9:Outer arm dynein light chain 1 protein 1Chr09:10129602–10197250 (-)2.887e-11
Glyma.16G057600 hypothetical protein AT3G27170:CLC-B:chloride channel B 1Chr16:5650591–5655830 (+)4.543e-12
Glyma.16G118400 hypothetical protein AT2G17190:AT2G17190:ubiquitin family protein 1Chr16:26356863–26371741 (-)5.332e-11
Glyma.16G178900 hypothetical protein AT4G25720:QC:glutaminyl cyclase 1Chr16:33954446–33960344 (+)7.795e-12
Glyma.19G011600 hypothetical protein NA 1Chr19:1111789–1116419 (+)1.962e-11
Glyma.19G011700 hypothetical protein AT3G01420:DOX1:Peroxidase superfamily protein 1Chr19:1123637–1130946 (+)1.962e-11
Glyma.19G012100 hypothetical protein AT3G28150:TBL22:TRICHOME BIREFRINGENCE-LIKE 22 1Chr19:1155711–1161298 (-)1.325e-12
Glyma.19G012300 hypothetical protein NA 1Chr19:1165111–1173031 (-)1.325e-12
Glyma.19G128200 hypothetical protein NA 1Chr19:38739769–38743404 (+)6.259e-12